RNA–Protein interactions for RNA: ENST00000569316.1

CMTM2-204, Transcript of CKLF like MARVEL transmembrane domain containing 2, humanhuman

TSL 5

Gene CMTM2, Length 454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM2-204ENST00000569316 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
CMTM2-204ENST00000569316 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
CMTM2-204ENST00000569316 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
CMTM2-204ENST00000569316 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
CMTM2-204ENST00000569316 BTAF1O14981 1849 aa13.34□□□□□ -0.27
CMTM2-204ENST00000569316 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
CMTM2-204ENST00000569316 IL13P35225 146 aa13.33□□□□□ -0.28
CMTM2-204ENST00000569316 BAG6P46379 1132 aa13.33□□□□□ -0.28
CMTM2-204ENST00000569316 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
CMTM2-204ENST00000569316 ITGB4P16144 1822 aa13.32□□□□□ -0.28
CMTM2-204ENST00000569316 KDRP35968 1356 aa13.32□□□□□ -0.28
CMTM2-204ENST00000569316 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
CMTM2-204ENST00000569316 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
CMTM2-204ENST00000569316 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
CMTM2-204ENST00000569316 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
CMTM2-204ENST00000569316 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
CMTM2-204ENST00000569316 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
CMTM2-204ENST00000569316 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
CMTM2-204ENST00000569316 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
CMTM2-204ENST00000569316 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
CMTM2-204ENST00000569316 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
CMTM2-204ENST00000569316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
CMTM2-204ENST00000569316 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
CMTM2-204ENST00000569316 CYP27B1O15528 508 aa13.29□□□□□ -0.28
CMTM2-204ENST00000569316 APBA3O96018 575 aa13.29□□□□□ -0.28
CMTM2-204ENST00000569316 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
CMTM2-204ENST00000569316 PCDH11XQ9BZA7 1347 aa13.29□□□□□ -0.28
CMTM2-204ENST00000569316 PCDH11YQ9BZA8 1340 aa13.29□□□□□ -0.28
CMTM2-204ENST00000569316 PLSCR1O15162 318 aa13.28□□□□□ -0.28
CMTM2-204ENST00000569316 KCNQ2O43526 872 aa13.28□□□□□ -0.28
CMTM2-204ENST00000569316 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
CMTM2-204ENST00000569316 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
CMTM2-204ENST00000569316 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
CMTM2-204ENST00000569316 ACSBG1Q96GR2 724 aa13.27□□□□□ -0.29
CMTM2-204ENST00000569316 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
CMTM2-204ENST00000569316 LY75O60449 1722 aa13.27□□□□□ -0.29
CMTM2-204ENST00000569316 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
CMTM2-204ENST00000569316 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
CMTM2-204ENST00000569316 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
CMTM2-204ENST00000569316 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
CMTM2-204ENST00000569316 PHKG2P15735 406 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
CMTM2-204ENST00000569316 RALBP1Q15311 655 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
CMTM2-204ENST00000569316 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 PROM2Q8N271 834 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
CMTM2-204ENST00000569316 ADAMTS7Q9UKP4 1686 aa13.22□□□□□ -0.29
CMTM2-204ENST00000569316 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
CMTM2-204ENST00000569316 TAF1LQ8IZX4 1826 aa13.21□□□□□ -0.29
CMTM2-204ENST00000569316 HMOX1P09601 288 aa13.21□□□□□ -0.29
CMTM2-204ENST00000569316 ZNF530Q6P9A1 599 aaPredicted RBP13.2□□□□□ -0.3
CMTM2-204ENST00000569316 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
CMTM2-204ENST00000569316 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
CMTM2-204ENST00000569316 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
CMTM2-204ENST00000569316 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
CMTM2-204ENST00000569316 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
CMTM2-204ENST00000569316 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
CMTM2-204ENST00000569316 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
CMTM2-204ENST00000569316 DLG5Q8TDM6 1919 aa13.18□□□□□ -0.3
CMTM2-204ENST00000569316 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
CMTM2-204ENST00000569316 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
CMTM2-204ENST00000569316 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
CMTM2-204ENST00000569316 QSER1Q2KHR3 1735 aa13.18□□□□□ -0.3
CMTM2-204ENST00000569316 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
CMTM2-204ENST00000569316 PIGBQ92521 554 aa13.17□□□□□ -0.3
CMTM2-204ENST00000569316 MRC1P22897 1456 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 C5P01031 1676 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
CMTM2-204ENST00000569316 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
CMTM2-204ENST00000569316 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
CMTM2-204ENST00000569316 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
CMTM2-204ENST00000569316 FCHSD2O94868 740 aa13.15□□□□□ -0.3
CMTM2-204ENST00000569316 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
CMTM2-204ENST00000569316 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
CMTM2-204ENST00000569316 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
CMTM2-204ENST00000569316 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
CMTM2-204ENST00000569316 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
CMTM2-204ENST00000569316 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
CMTM2-204ENST00000569316 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
CMTM2-204ENST00000569316 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
CMTM2-204ENST00000569316 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
CMTM2-204ENST00000569316 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
CMTM2-204ENST00000569316 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
CMTM2-204ENST00000569316 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
CMTM2-204ENST00000569316 LRP5O75197 1615 aa13.13□□□□□ -0.31
CMTM2-204ENST00000569316 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
CMTM2-204ENST00000569316 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
CMTM2-204ENST00000569316 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
CMTM2-204ENST00000569316 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
CMTM2-204ENST00000569316 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
CMTM2-204ENST00000569316 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
CMTM2-204ENST00000569316 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms