RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-225ENST00000569245 AMER1Q5JTC6 1135 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-225ENST00000569245 CNGB1Q14028 1251 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-225ENST00000569245 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
COMMD4-225ENST00000569245 EYA1Q99502 592 aa19.68■□□□□ 0.74
COMMD4-225ENST00000569245 CC2D1BQ5T0F9 858 aaKnown RBP19.67■□□□□ 0.74
COMMD4-225ENST00000569245 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
COMMD4-225ENST00000569245 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
COMMD4-225ENST00000569245 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
COMMD4-225ENST00000569245 SBF2Q86WG5 1849 aa19.65■□□□□ 0.74
COMMD4-225ENST00000569245 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-225ENST00000569245 PROM2Q8N271 834 aa19.65■□□□□ 0.74
COMMD4-225ENST00000569245 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
COMMD4-225ENST00000569245 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
COMMD4-225ENST00000569245 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
COMMD4-225ENST00000569245 ANKRD26Q9UPS8 1709 aa19.64■□□□□ 0.73
COMMD4-225ENST00000569245 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
COMMD4-225ENST00000569245 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
COMMD4-225ENST00000569245 RREB1Q92766 1687 aa19.6■□□□□ 0.73
COMMD4-225ENST00000569245 CYP27B1O15528 508 aa19.6■□□□□ 0.73
COMMD4-225ENST00000569245 STK32BQ9NY57 414 aa19.6■□□□□ 0.73
COMMD4-225ENST00000569245 MTHFSP49914 203 aa19.59■□□□□ 0.73
COMMD4-225ENST00000569245 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-225ENST00000569245 NUP188Q5SRE5 1749 aa19.59■□□□□ 0.73
COMMD4-225ENST00000569245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.72
COMMD4-225ENST00000569245 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
COMMD4-225ENST00000569245 KAT6BQ8WYB5 2073 aa19.58■□□□□ 0.72
COMMD4-225ENST00000569245 IGSF1Q8N6C5 1336 aa19.57■□□□□ 0.72
COMMD4-225ENST00000569245 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
COMMD4-225ENST00000569245 RGPD3A6NKT7 1758 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-225ENST00000569245 RGPD4Q7Z3J3 1758 aa19.56■□□□□ 0.72
COMMD4-225ENST00000569245 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
COMMD4-225ENST00000569245 SLC15A2Q16348 729 aa19.55■□□□□ 0.72
COMMD4-225ENST00000569245 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
COMMD4-225ENST00000569245 IFNL2Q8IZJ0 200 aa19.55■□□□□ 0.72
COMMD4-225ENST00000569245 IL13P35225 146 aa19.54■□□□□ 0.72
COMMD4-225ENST00000569245 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-225ENST00000569245 SLC27A3Q5K4L6 730 aa19.54■□□□□ 0.72
COMMD4-225ENST00000569245 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
COMMD4-225ENST00000569245 KCNQ4P56696 695 aa19.53■□□□□ 0.72
COMMD4-225ENST00000569245 DIEXFQ68CQ4 756 aaKnown RBP19.53■□□□□ 0.72
COMMD4-225ENST00000569245 AEBP1Q8IUX7 1158 aa19.53■□□□□ 0.72
COMMD4-225ENST00000569245 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
COMMD4-225ENST00000569245 SHANK3Q9BYB0 1731 aa19.53■□□□□ 0.72
COMMD4-225ENST00000569245 BTAF1O14981 1849 aa19.53■□□□□ 0.72
COMMD4-225ENST00000569245 PHKG2P15735 406 aa19.52■□□□□ 0.72
COMMD4-225ENST00000569245 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-225ENST00000569245 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
COMMD4-225ENST00000569245 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
COMMD4-225ENST00000569245 SPON1Q9HCB6 807 aa19.51■□□□□ 0.71
COMMD4-225ENST00000569245 CCNL1Q9UK58 526 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-225ENST00000569245 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
COMMD4-225ENST00000569245 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-225ENST00000569245 PDGFDQ9GZP0 370 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-225ENST00000569245 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
COMMD4-225ENST00000569245 ZBTB7AO95365 584 aa19.48■□□□□ 0.71
COMMD4-225ENST00000569245 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
COMMD4-225ENST00000569245 HMOX1P09601 288 aa19.48■□□□□ 0.71
COMMD4-225ENST00000569245 ZNF827Q17R98 1081 aa19.48■□□□□ 0.71
COMMD4-225ENST00000569245 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
COMMD4-225ENST00000569245 PIGBQ92521 554 aa19.48■□□□□ 0.71
COMMD4-225ENST00000569245 PPP1R1BQ9UD71 204 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-225ENST00000569245 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
COMMD4-225ENST00000569245 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-225ENST00000569245 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
COMMD4-225ENST00000569245 PKD1L3Q7Z443 1732 aa19.47■□□□□ 0.71
COMMD4-225ENST00000569245 LRP5O75197 1615 aa19.47■□□□□ 0.71
COMMD4-225ENST00000569245 PALLDQ8WX93 1383 aa19.46■□□□□ 0.71
COMMD4-225ENST00000569245 U2SURPO15042 1029 aaKnown RBP19.45■□□□□ 0.7
COMMD4-225ENST00000569245 AKT1S1Q96B36 256 aa19.45■□□□□ 0.7
COMMD4-225ENST00000569245 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
COMMD4-225ENST00000569245 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
COMMD4-225ENST00000569245 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
COMMD4-225ENST00000569245 KDRP35968 1356 aa19.44■□□□□ 0.7
COMMD4-225ENST00000569245 ERVV-2B6SEH9 535 aa19.43■□□□□ 0.7
COMMD4-225ENST00000569245 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
COMMD4-225ENST00000569245 CABP4P57796 275 aa19.42■□□□□ 0.7
COMMD4-225ENST00000569245 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
COMMD4-225ENST00000569245 MSH5O43196 834 aa19.41■□□□□ 0.7
COMMD4-225ENST00000569245 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
COMMD4-225ENST00000569245 MTFR1LQ9H019 292 aa19.41■□□□□ 0.7
COMMD4-225ENST00000569245 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 SIK1P57059 783 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 AKAP4Q5JQC9 854 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 ATG3Q9NT62 314 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 PAPPAQ13219 1627 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 TOGARAM1Q9Y4F4 1720 aa19.39■□□□□ 0.69
COMMD4-225ENST00000569245 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
COMMD4-225ENST00000569245 KDM6AO15550 1401 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-225ENST00000569245 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 PTGER2P43116 358 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 MTHFSDQ2M296 383 aaKnown RBP19.36■□□□□ 0.69
COMMD4-225ENST00000569245 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 AK7Q96M32 723 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
COMMD4-225ENST00000569245 CASZ1Q86V15 1759 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 LY75O60449 1722 aa19.36■□□□□ 0.69
COMMD4-225ENST00000569245 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-225ENST00000569245 SLC16A10Q8TF71 515 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms