RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
CFDP1-207ENST00000566901 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
CFDP1-207ENST00000566901 APAF1O14727 1248 aa16.49■□□□□ 0.23
CFDP1-207ENST00000566901 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
CFDP1-207ENST00000566901 VPS72Q15906 364 aa16.48■□□□□ 0.23
CFDP1-207ENST00000566901 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
CFDP1-207ENST00000566901 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
CFDP1-207ENST00000566901 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
CFDP1-207ENST00000566901 NEFMP07197 916 aa16.47■□□□□ 0.23
CFDP1-207ENST00000566901 NRAPQ86VF7 1730 aa16.46■□□□□ 0.23
CFDP1-207ENST00000566901 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
CFDP1-207ENST00000566901 KRT27Q7Z3Y8 459 aa16.46■□□□□ 0.23
CFDP1-207ENST00000566901 EYA1Q99502 592 aa16.45■□□□□ 0.22
CFDP1-207ENST00000566901 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
CFDP1-207ENST00000566901 COL14A1Q05707 1796 aaKnown RBP16.44■□□□□ 0.22
CFDP1-207ENST00000566901 SULT6B1Q6IMI4 303 aa16.44■□□□□ 0.22
CFDP1-207ENST00000566901 ERBB3P21860 1342 aa16.44■□□□□ 0.22
CFDP1-207ENST00000566901 HMOX1P09601 288 aa16.43■□□□□ 0.22
CFDP1-207ENST00000566901 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
CFDP1-207ENST00000566901 ZC3H6P61129 1189 aaKnown RBP16.43■□□□□ 0.22
CFDP1-207ENST00000566901 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
CFDP1-207ENST00000566901 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 BAG6P46379 1132 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 POLA2Q14181 598 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 ANKRD24Q8TF21 1146 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
CFDP1-207ENST00000566901 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
CFDP1-207ENST00000566901 AEBP1Q8IUX7 1158 aa16.41■□□□□ 0.22
CFDP1-207ENST00000566901 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
CFDP1-207ENST00000566901 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
CFDP1-207ENST00000566901 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
CFDP1-207ENST00000566901 AXIN2Q9Y2T1 843 aa16.4■□□□□ 0.22
CFDP1-207ENST00000566901 IL16Q14005 1332 aa16.4■□□□□ 0.22
CFDP1-207ENST00000566901 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
CFDP1-207ENST00000566901 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
CFDP1-207ENST00000566901 E9PSI1 815 aa16.39■□□□□ 0.21
CFDP1-207ENST00000566901 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
CFDP1-207ENST00000566901 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
CFDP1-207ENST00000566901 COL5A2P05997 1499 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-207ENST00000566901 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
CFDP1-207ENST00000566901 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
CFDP1-207ENST00000566901 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
CFDP1-207ENST00000566901 LRP5O75197 1615 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
CFDP1-207ENST00000566901 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
CFDP1-207ENST00000566901 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
CFDP1-207ENST00000566901 RIPK4P57078 832 aa16.36■□□□□ 0.21
CFDP1-207ENST00000566901 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
CFDP1-207ENST00000566901 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
CFDP1-207ENST00000566901 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
CFDP1-207ENST00000566901 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
CFDP1-207ENST00000566901 FAM182BQ5T319 152 aa16.35■□□□□ 0.21
CFDP1-207ENST00000566901 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
CFDP1-207ENST00000566901 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
CFDP1-207ENST00000566901 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
CFDP1-207ENST00000566901 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
CFDP1-207ENST00000566901 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
CFDP1-207ENST00000566901 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.2
CFDP1-207ENST00000566901 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.2
CFDP1-207ENST00000566901 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
CFDP1-207ENST00000566901 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
CFDP1-207ENST00000566901 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
CFDP1-207ENST00000566901 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
CFDP1-207ENST00000566901 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
CFDP1-207ENST00000566901 PARP4Q9UKK3 1724 aaKnown RBP16.31■□□□□ 0.2
CFDP1-207ENST00000566901 MAP3K5Q99683 1374 aa16.3■□□□□ 0.2
CFDP1-207ENST00000566901 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
CFDP1-207ENST00000566901 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
CFDP1-207ENST00000566901 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
CFDP1-207ENST00000566901 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
CFDP1-207ENST00000566901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.25e-7■■■□□ 17.5
CFDP1-207ENST00000566901 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
CFDP1-207ENST00000566901 CRB1P82279 1406 aa16.29■□□□□ 0.2
CFDP1-207ENST00000566901 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
CFDP1-207ENST00000566901 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
CFDP1-207ENST00000566901 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
CFDP1-207ENST00000566901 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
CFDP1-207ENST00000566901 MEGF6O75095 1541 aa16.28■□□□□ 0.2
CFDP1-207ENST00000566901 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.2
CFDP1-207ENST00000566901 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
CFDP1-207ENST00000566901 EVA1CP58658 441 aa16.27■□□□□ 0.2
CFDP1-207ENST00000566901 GNAI1P63096 354 aa16.27■□□□□ 0.2
CFDP1-207ENST00000566901 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
CFDP1-207ENST00000566901 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
CFDP1-207ENST00000566901 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
CFDP1-207ENST00000566901 TRIM37O94972 964 aa16.26■□□□□ 0.19
CFDP1-207ENST00000566901 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms