RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 CRB1P82279 1406 aa12.93□□□□□ -0.34
CCNDBP1-210ENST00000566882 KDRP35968 1356 aa12.92□□□□□ -0.34
CCNDBP1-210ENST00000566882 UBE2Q2Q8WVN8 375 aa12.92□□□□□ -0.34
CCNDBP1-210ENST00000566882 LTN1O94822 1766 aa12.92□□□□□ -0.34
CCNDBP1-210ENST00000566882 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
CCNDBP1-210ENST00000566882 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
CCNDBP1-210ENST00000566882 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-210ENST00000566882 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
CCNDBP1-210ENST00000566882 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
CCNDBP1-210ENST00000566882 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
CCNDBP1-210ENST00000566882 HSPA2P54652 639 aa12.9□□□□□ -0.34
CCNDBP1-210ENST00000566882 AAMPQ13685 434 aa12.9□□□□□ -0.34
CCNDBP1-210ENST00000566882 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.35
CCNDBP1-210ENST00000566882 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.35
CCNDBP1-210ENST00000566882 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.35
CCNDBP1-210ENST00000566882 NBPF4Q96M43 638 aa12.9□□□□□ -0.35
CCNDBP1-210ENST00000566882 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
CCNDBP1-210ENST00000566882 NFAT5O94916 1531 aa12.89□□□□□ -0.35
CCNDBP1-210ENST00000566882 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
CCNDBP1-210ENST00000566882 ABCC4O15439 1325 aa12.89□□□□□ -0.35
CCNDBP1-210ENST00000566882 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
CCNDBP1-210ENST00000566882 SIRT2Q8IXJ6 389 aa12.88□□□□□ -0.35
CCNDBP1-210ENST00000566882 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
CCNDBP1-210ENST00000566882 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
CCNDBP1-210ENST00000566882 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
CCNDBP1-210ENST00000566882 G2E3Q7L622 706 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 USP19O94966 1318 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 IP6K1Q92551 441 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 ARHGAP45Q92619 1136 aa12.87□□□□□ -0.35
CCNDBP1-210ENST00000566882 MSH6P52701 1360 aa12.86□□□□□ -0.35
CCNDBP1-210ENST00000566882 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
CCNDBP1-210ENST00000566882 RGS12O14924 1447 aa12.86□□□□□ -0.35
CCNDBP1-210ENST00000566882 VIRMAQ69YN4 1812 aaKnown RBP12.86□□□□□ -0.35
CCNDBP1-210ENST00000566882 GCP02774 474 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 SMC5Q8IY18 1101 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
CCNDBP1-210ENST00000566882 F6X3S4 739 aa12.84□□□□□ -0.35
CCNDBP1-210ENST00000566882 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
CCNDBP1-210ENST00000566882 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
CCNDBP1-210ENST00000566882 KIAA0232Q92628 1395 aa12.83□□□□□ -0.35
CCNDBP1-210ENST00000566882 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
CCNDBP1-210ENST00000566882 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CCNDBP1-210ENST00000566882 KIF24Q5T7B8 1368 aa12.83□□□□□ -0.36
CCNDBP1-210ENST00000566882 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 MAP3K5Q99683 1374 aa12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
CCNDBP1-210ENST00000566882 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
CCNDBP1-210ENST00000566882 NUCB1Q02818 461 aa12.81□□□□□ -0.36
CCNDBP1-210ENST00000566882 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
CCNDBP1-210ENST00000566882 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
CCNDBP1-210ENST00000566882 KCNQ3O43525 872 aa12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 INTS3Q68E01 1043 aaKnown RBP12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 MEIS3Q99687 375 aa12.8□□□□□ -0.36
CCNDBP1-210ENST00000566882 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
CCNDBP1-210ENST00000566882 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
CCNDBP1-210ENST00000566882 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
CCNDBP1-210ENST00000566882 MST1RQ04912 1400 aa12.79□□□□□ -0.36
CCNDBP1-210ENST00000566882 PXDNQ92626 1479 aa12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 SLIT3O75094 1523 aa12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 ATF3P18847 181 aa12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
CCNDBP1-210ENST00000566882 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
CCNDBP1-210ENST00000566882 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
CCNDBP1-210ENST00000566882 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 APBB1O00213 710 aa12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 C16orf71Q8IYS4 520 aaPredicted RBP12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 PTPRCP08575 1304 aa12.76□□□□□ -0.37
CCNDBP1-210ENST00000566882 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 CEMIPQ8WUJ3 1361 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 ANXA1P04083 346 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 MFAP1P55081 439 aaKnown RBP12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 FLIIQ13045 1269 aa12.75□□□□□ -0.37
CCNDBP1-210ENST00000566882 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
CCNDBP1-210ENST00000566882 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
CCNDBP1-210ENST00000566882 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
CCNDBP1-210ENST00000566882 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms