RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 NHSQ6T4R5 1651 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 FYB1O15117 783 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 HOXC9P31274 260 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 BTAF1O14981 1849 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
GTF3C1-206ENST00000566779 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 EXOC5O00471 708 aa13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 IL2RBP14784 551 aa13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 MARCH10Q8NA82 808 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 IP6K1Q92551 441 aa13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 SHANK3Q9BYB0 1731 aa13.98□□□□□ -0.17
GTF3C1-206ENST00000566779 USHBP1Q8N6Y0 703 aa13.97□□□□□ -0.17
GTF3C1-206ENST00000566779 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
GTF3C1-206ENST00000566779 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
GTF3C1-206ENST00000566779 TNNT2P45379 298 aaPredicted RBP13.96□□□□□ -0.17
GTF3C1-206ENST00000566779 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.17
GTF3C1-206ENST00000566779 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.17
GTF3C1-206ENST00000566779 LRP5O75197 1615 aa13.95□□□□□ -0.18
GTF3C1-206ENST00000566779 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
GTF3C1-206ENST00000566779 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
GTF3C1-206ENST00000566779 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
GTF3C1-206ENST00000566779 FLT4P35916 1363 aa13.94□□□□□ -0.18
GTF3C1-206ENST00000566779 PARD3Q8TEW0 1356 aa13.94□□□□□ -0.18
GTF3C1-206ENST00000566779 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 C11orf95C9JLR9 678 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 MEGF6O75095 1541 aa13.93□□□□□ -0.18
GTF3C1-206ENST00000566779 HSP90AB2PQ58FF8 381 aa13.92□□□□□ -0.18
GTF3C1-206ENST00000566779 KCNQ2O43526 872 aa13.91□□□□□ -0.18
GTF3C1-206ENST00000566779 NBPF14Q5TI25 921 aa13.91□□□□□ -0.18
GTF3C1-206ENST00000566779 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-206ENST00000566779 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
GTF3C1-206ENST00000566779 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
GTF3C1-206ENST00000566779 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-206ENST00000566779 PANK3Q9H999 370 aa13.9□□□□□ -0.18
GTF3C1-206ENST00000566779 INSRP06213 1382 aa13.89□□□□□ -0.19
GTF3C1-206ENST00000566779 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-206ENST00000566779 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
GTF3C1-206ENST00000566779 RAPGEF4Q8WZA2 1011 aa13.89□□□□□ -0.19
GTF3C1-206ENST00000566779 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
GTF3C1-206ENST00000566779 ITGB4P16144 1822 aa13.87□□□□□ -0.19
GTF3C1-206ENST00000566779 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
GTF3C1-206ENST00000566779 BCL9O00512 1426 aa13.87□□□□□ -0.19
GTF3C1-206ENST00000566779 TATP17735 454 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 TOGARAM1Q9Y4F4 1720 aa13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 KIF7Q2M1P5 1343 aa13.86□□□□□ -0.19
GTF3C1-206ENST00000566779 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
GTF3C1-206ENST00000566779 SPOCK2Q92563 424 aa13.85□□□□□ -0.19
GTF3C1-206ENST00000566779 CASZ1Q86V15 1759 aa13.85□□□□□ -0.19
GTF3C1-206ENST00000566779 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 PLSCR1O15162 318 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 LY75O60449 1722 aa13.84□□□□□ -0.19
GTF3C1-206ENST00000566779 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
GTF3C1-206ENST00000566779 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
GTF3C1-206ENST00000566779 NSD2O96028 1365 aa13.83□□□□□ -0.2
GTF3C1-206ENST00000566779 PRIM1P49642 420 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-206ENST00000566779 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
GTF3C1-206ENST00000566779 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
GTF3C1-206ENST00000566779 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
GTF3C1-206ENST00000566779 PPP1R1BQ9UD71 204 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-206ENST00000566779 C5P01031 1676 aa13.8□□□□□ -0.2
GTF3C1-206ENST00000566779 KCNQ4P56696 695 aa13.8□□□□□ -0.2
GTF3C1-206ENST00000566779 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
GTF3C1-206ENST00000566779 VIRMAQ69YN4 1812 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-206ENST00000566779 ZBTB7AO95365 584 aa13.79□□□□□ -0.2
GTF3C1-206ENST00000566779 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-206ENST00000566779 CC2D1BQ5T0F9 858 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-206ENST00000566779 EYA1Q99502 592 aa13.79□□□□□ -0.2
GTF3C1-206ENST00000566779 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-206ENST00000566779 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
GTF3C1-206ENST00000566779 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
GTF3C1-206ENST00000566779 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
GTF3C1-206ENST00000566779 SPON1Q9HCB6 807 aa13.77□□□□□ -0.21
GTF3C1-206ENST00000566779 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
GTF3C1-206ENST00000566779 CYP27B1O15528 508 aa13.76□□□□□ -0.21
GTF3C1-206ENST00000566779 SLC15A2Q16348 729 aa13.76□□□□□ -0.21
GTF3C1-206ENST00000566779 MPRIPQ6WCQ1 1025 aa13.76□□□□□ -0.21
GTF3C1-206ENST00000566779 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
GTF3C1-206ENST00000566779 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
GTF3C1-206ENST00000566779 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-206ENST00000566779 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
GTF3C1-206ENST00000566779 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
GTF3C1-206ENST00000566779 PALLDQ8WX93 1383 aa13.72□□□□□ -0.21
GTF3C1-206ENST00000566779 IGSF1Q8N6C5 1336 aa13.72□□□□□ -0.21
GTF3C1-206ENST00000566779 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
GTF3C1-206ENST00000566779 SRCAPQ6ZRS2 3230 aa13.71□□□□□ -0.21
GTF3C1-206ENST00000566779 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-206ENST00000566779 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms