RNA–Protein interactions for RNA: ENST00000566685.1

GGA2-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-208ENST00000566685 KAT6BQ8WYB5 2073 aa22.21■■□□□ 1.15
GGA2-208ENST00000566685 PARD3Q8TEW0 1356 aa22.18■■□□□ 1.14
GGA2-208ENST00000566685 IGSF1Q8N6C5 1336 aa22.18■■□□□ 1.14
GGA2-208ENST00000566685 PCDH11XQ9BZA7 1347 aa22.18■■□□□ 1.14
GGA2-208ENST00000566685 PCDH11YQ9BZA8 1340 aa22.18■■□□□ 1.14
GGA2-208ENST00000566685 EN1Q05925 392 aaPredicted RBP22.18■■□□□ 1.14
GGA2-208ENST00000566685 SPG7Q9UQ90 795 aa22.18■■□□□ 1.14
GGA2-208ENST00000566685 PLEKHG2Q9H7P9 1386 aa22.17■■□□□ 1.14
GGA2-208ENST00000566685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.14
GGA2-208ENST00000566685 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
GGA2-208ENST00000566685 IL13P35225 146 aa22.15■■□□□ 1.14
GGA2-208ENST00000566685 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
GGA2-208ENST00000566685 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
GGA2-208ENST00000566685 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.13
GGA2-208ENST00000566685 PLSCR1O15162 318 aa22.13■■□□□ 1.13
GGA2-208ENST00000566685 CAMKK2Q96RR4 588 aa22.13■■□□□ 1.13
GGA2-208ENST00000566685 NHSQ6T4R5 1651 aa22.13■■□□□ 1.13
GGA2-208ENST00000566685 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
GGA2-208ENST00000566685 ACSBG1Q96GR2 724 aa22.12■■□□□ 1.13
GGA2-208ENST00000566685 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
GGA2-208ENST00000566685 RGPD3A6NKT7 1758 aaPredicted RBP22.1■■□□□ 1.13
GGA2-208ENST00000566685 RGPD4Q7Z3J3 1758 aa22.1■■□□□ 1.13
GGA2-208ENST00000566685 KCNQ2O43526 872 aa22.1■■□□□ 1.13
GGA2-208ENST00000566685 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
GGA2-208ENST00000566685 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
GGA2-208ENST00000566685 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
GGA2-208ENST00000566685 SULT6B1Q6IMI4 303 aa22.1■■□□□ 1.13
GGA2-208ENST00000566685 CYP27B1O15528 508 aa22.08■■□□□ 1.13
GGA2-208ENST00000566685 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
GGA2-208ENST00000566685 SYTL4Q96C24 671 aaPredicted RBP22.08■■□□□ 1.13
GGA2-208ENST00000566685 KDRP35968 1356 aa22.08■■□□□ 1.12
GGA2-208ENST00000566685 PTF1AQ7RTS3 328 aa22.07■■□□□ 1.12
GGA2-208ENST00000566685 NUDCQ9Y266 331 aa22.07■■□□□ 1.12
GGA2-208ENST00000566685 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
GGA2-208ENST00000566685 RALBP1Q15311 655 aa22.06■■□□□ 1.12
GGA2-208ENST00000566685 AEBP1Q8IUX7 1158 aa22.06■■□□□ 1.12
GGA2-208ENST00000566685 DOT1LQ8TEK3 1739 aa22.06■■□□□ 1.12
GGA2-208ENST00000566685 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
GGA2-208ENST00000566685 NBPF14Q5TI25 921 aa22.05■■□□□ 1.12
GGA2-208ENST00000566685 BTAF1O14981 1849 aa22.05■■□□□ 1.12
GGA2-208ENST00000566685 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
GGA2-208ENST00000566685 HSP90AB1P08238 724 aaKnown RBP22.04■■□□□ 1.12
GGA2-208ENST00000566685 RREB1Q92766 1687 aa22.04■■□□□ 1.12
GGA2-208ENST00000566685 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
GGA2-208ENST00000566685 PHKG2P15735 406 aa22.03■■□□□ 1.12
GGA2-208ENST00000566685 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
GGA2-208ENST00000566685 HMOX1P09601 288 aa22.02■■□□□ 1.12
GGA2-208ENST00000566685 C1orf141Q5JVX7 400 aa22.02■■□□□ 1.12
GGA2-208ENST00000566685 TXNRD1Q16881 649 aa22.01■■□□□ 1.11
GGA2-208ENST00000566685 ZNF530Q6P9A1 599 aaPredicted RBP22.01■■□□□ 1.11
GGA2-208ENST00000566685 DCAF5Q96JK2 942 aa21.99■■□□□ 1.11
GGA2-208ENST00000566685 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
GGA2-208ENST00000566685 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
GGA2-208ENST00000566685 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
GGA2-208ENST00000566685 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
GGA2-208ENST00000566685 PROM2Q8N271 834 aa21.97■■□□□ 1.11
GGA2-208ENST00000566685 ITGB4P16144 1822 aa21.96■■□□□ 1.11
GGA2-208ENST00000566685 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
GGA2-208ENST00000566685 ERVV-2B6SEH9 535 aa21.95■■□□□ 1.1
GGA2-208ENST00000566685 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
GGA2-208ENST00000566685 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
GGA2-208ENST00000566685 SMARCC1Q92922 1105 aaPredicted RBP21.95■■□□□ 1.1
GGA2-208ENST00000566685 R3HDM1Q15032 1099 aaKnown RBP21.94■■□□□ 1.1
GGA2-208ENST00000566685 AKAP4Q5JQC9 854 aa21.94■■□□□ 1.1
GGA2-208ENST00000566685 MYBBP1AQ9BQG0 1328 aaKnown RBP21.94■■□□□ 1.1
GGA2-208ENST00000566685 TOGARAM1Q9Y4F4 1720 aa21.94■■□□□ 1.1
GGA2-208ENST00000566685 PSDA5PKW4 1024 aaPredicted RBP21.93■■□□□ 1.1
GGA2-208ENST00000566685 FCHSD2O94868 740 aa21.93■■□□□ 1.1
GGA2-208ENST00000566685 PIGBQ92521 554 aa21.92■■□□□ 1.1
GGA2-208ENST00000566685 STK32BQ9NY57 414 aa21.92■■□□□ 1.1
GGA2-208ENST00000566685 LY75O60449 1722 aa21.92■■□□□ 1.1
GGA2-208ENST00000566685 GAS2L2Q8NHY3 880 aa21.91■■□□□ 1.1
GGA2-208ENST00000566685 NEFMP07197 916 aa21.9■■□□□ 1.1
GGA2-208ENST00000566685 CABP4P57796 275 aa21.9■■□□□ 1.1
GGA2-208ENST00000566685 MTHFSDQ2M296 383 aaKnown RBP21.9■■□□□ 1.1
GGA2-208ENST00000566685 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
GGA2-208ENST00000566685 RSPH6AQ9H0K4 717 aa21.89■■□□□ 1.09
GGA2-208ENST00000566685 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
GGA2-208ENST00000566685 PRKRIP1Q9H875 184 aaPredicted RBP21.89■■□□□ 1.09
GGA2-208ENST00000566685 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.09
GGA2-208ENST00000566685 PALLDQ8WX93 1383 aa21.88■■□□□ 1.09
GGA2-208ENST00000566685 KDM6AO15550 1401 aaPredicted RBP21.88■■□□□ 1.09
GGA2-208ENST00000566685 SCN11AQ9UI33 1791 aa21.87■■□□□ 1.09
GGA2-208ENST00000566685 SLC15A2Q16348 729 aa21.86■■□□□ 1.09
GGA2-208ENST00000566685 LRRC4BQ9NT99 713 aa21.86■■□□□ 1.09
GGA2-208ENST00000566685 GNAT3A8MTJ3 354 aa21.85■■□□□ 1.09
GGA2-208ENST00000566685 ANO8Q9HCE9 1232 aaPredicted RBP21.85■■□□□ 1.09
GGA2-208ENST00000566685 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
GGA2-208ENST00000566685 RNMTO43148 476 aaKnown RBP21.83■■□□□ 1.09
GGA2-208ENST00000566685 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
GGA2-208ENST00000566685 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
GGA2-208ENST00000566685 MAP3K5Q99683 1374 aa21.83■■□□□ 1.08
GGA2-208ENST00000566685 PAPPAQ13219 1627 aa21.82■■□□□ 1.08
GGA2-208ENST00000566685 SLC52A2Q9HAB3 445 aa21.82■■□□□ 1.08
GGA2-208ENST00000566685 ATG3Q9NT62 314 aa21.82■■□□□ 1.08
GGA2-208ENST00000566685 VIRMAQ69YN4 1812 aaKnown RBP21.82■■□□□ 1.08
GGA2-208ENST00000566685 LOC102724428A0A0B4J2F2 783 aa21.81■■□□□ 1.08
GGA2-208ENST00000566685 SIK1P57059 783 aa21.81■■□□□ 1.08
GGA2-208ENST00000566685 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
GGA2-208ENST00000566685 KCNQ4P56696 695 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms