RNA–Protein interactions for RNA: ENST00000566649.1

LINC02140-202, Transcript of long intergenic non-protein coding RNA 2140, humanhuman

TSL 2 BASIC

Gene LINC02140, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02140-202ENST00000566649 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
LINC02140-202ENST00000566649 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.3
LINC02140-202ENST00000566649 MEGF6O75095 1541 aa16.95■□□□□ 0.3
LINC02140-202ENST00000566649 PKD1L3Q7Z443 1732 aa16.94■□□□□ 0.3
LINC02140-202ENST00000566649 THUMPD2Q9BTF0 503 aaKnown RBP16.94■□□□□ 0.3
LINC02140-202ENST00000566649 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
LINC02140-202ENST00000566649 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
LINC02140-202ENST00000566649 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
LINC02140-202ENST00000566649 CRB1P82279 1406 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
LINC02140-202ENST00000566649 DCTN1Q14203 1278 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 LRRC37A3O60309 1634 aa16.93■□□□□ 0.3
LINC02140-202ENST00000566649 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
LINC02140-202ENST00000566649 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
LINC02140-202ENST00000566649 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
LINC02140-202ENST00000566649 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
LINC02140-202ENST00000566649 MCM10Q7L590 875 aa16.92■□□□□ 0.3
LINC02140-202ENST00000566649 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
LINC02140-202ENST00000566649 IL16Q14005 1332 aa16.92■□□□□ 0.3
LINC02140-202ENST00000566649 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
LINC02140-202ENST00000566649 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
LINC02140-202ENST00000566649 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
LINC02140-202ENST00000566649 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
LINC02140-202ENST00000566649 LRP6O75581 1613 aa16.91■□□□□ 0.3
LINC02140-202ENST00000566649 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
LINC02140-202ENST00000566649 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
LINC02140-202ENST00000566649 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.29
LINC02140-202ENST00000566649 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
LINC02140-202ENST00000566649 C8orf37Q96NL8 207 aa16.89■□□□□ 0.29
LINC02140-202ENST00000566649 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
LINC02140-202ENST00000566649 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
LINC02140-202ENST00000566649 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
LINC02140-202ENST00000566649 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
LINC02140-202ENST00000566649 SLIT2O94813 1529 aa16.88■□□□□ 0.29
LINC02140-202ENST00000566649 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
LINC02140-202ENST00000566649 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
LINC02140-202ENST00000566649 RCAN3Q9UKA8 241 aa16.87■□□□□ 0.29
LINC02140-202ENST00000566649 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
LINC02140-202ENST00000566649 GNAI1P63096 354 aa16.87■□□□□ 0.29
LINC02140-202ENST00000566649 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
LINC02140-202ENST00000566649 IL2RBP14784 551 aa16.86■□□□□ 0.29
LINC02140-202ENST00000566649 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
LINC02140-202ENST00000566649 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
LINC02140-202ENST00000566649 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
LINC02140-202ENST00000566649 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
LINC02140-202ENST00000566649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC02140-202ENST00000566649 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
LINC02140-202ENST00000566649 NEFLP07196 543 aa16.84■□□□□ 0.29
LINC02140-202ENST00000566649 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
LINC02140-202ENST00000566649 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.29
LINC02140-202ENST00000566649 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
LINC02140-202ENST00000566649 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
LINC02140-202ENST00000566649 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
LINC02140-202ENST00000566649 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
LINC02140-202ENST00000566649 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
LINC02140-202ENST00000566649 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
LINC02140-202ENST00000566649 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
LINC02140-202ENST00000566649 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
LINC02140-202ENST00000566649 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
LINC02140-202ENST00000566649 PHKG2P15735 406 aa16.81■□□□□ 0.28
LINC02140-202ENST00000566649 UNC5CLQ8IV45 518 aa16.81■□□□□ 0.28
LINC02140-202ENST00000566649 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
LINC02140-202ENST00000566649 KDM3BQ7LBC6 1761 aa16.81■□□□□ 0.28
LINC02140-202ENST00000566649 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
LINC02140-202ENST00000566649 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 TEFQ10587 303 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
LINC02140-202ENST00000566649 CYP27B1O15528 508 aa16.79■□□□□ 0.28
LINC02140-202ENST00000566649 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
LINC02140-202ENST00000566649 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
LINC02140-202ENST00000566649 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
LINC02140-202ENST00000566649 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
LINC02140-202ENST00000566649 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
LINC02140-202ENST00000566649 CHL1O00533 1208 aa16.79■□□□□ 0.28
LINC02140-202ENST00000566649 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
LINC02140-202ENST00000566649 USP21Q9UK80 565 aa16.78■□□□□ 0.28
LINC02140-202ENST00000566649 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
LINC02140-202ENST00000566649 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
LINC02140-202ENST00000566649 IRX6P78412 446 aaPredicted RBP16.77■□□□□ 0.28
LINC02140-202ENST00000566649 FNBP4Q8N3X1 1017 aaPredicted RBP16.77■□□□□ 0.28
LINC02140-202ENST00000566649 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.27
LINC02140-202ENST00000566649 RRP1P56182 461 aaKnown RBP16.77■□□□□ 0.27
LINC02140-202ENST00000566649 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.27
LINC02140-202ENST00000566649 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
LINC02140-202ENST00000566649 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
LINC02140-202ENST00000566649 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
LINC02140-202ENST00000566649 FKBP8Q14318 412 aa16.75■□□□□ 0.27
LINC02140-202ENST00000566649 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
LINC02140-202ENST00000566649 AFF2P51816 1311 aa16.75■□□□□ 0.27
LINC02140-202ENST00000566649 MRC1P22897 1456 aa16.75■□□□□ 0.27
LINC02140-202ENST00000566649 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
LINC02140-202ENST00000566649 VPS72Q15906 364 aa16.75■□□□□ 0.27
LINC02140-202ENST00000566649 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
LINC02140-202ENST00000566649 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms