RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 RABEP1Q15276 862 aa17.58■□□□□ 0.41
CDH1-209ENST00000566510 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.41
CDH1-209ENST00000566510 NAP1L5Q96NT1 182 aaPredicted RBP17.58■□□□□ 0.41
CDH1-209ENST00000566510 MSH6P52701 1360 aa17.58■□□□□ 0.41
CDH1-209ENST00000566510 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.4
CDH1-209ENST00000566510 PTMSP20962 102 aa17.58■□□□□ 0.4
CDH1-209ENST00000566510 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
CDH1-209ENST00000566510 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.4
CDH1-209ENST00000566510 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.4
CDH1-209ENST00000566510 CHL1O00533 1208 aa17.57■□□□□ 0.4
CDH1-209ENST00000566510 SDSP20132 328 aa17.57■□□□□ 0.4
CDH1-209ENST00000566510 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
CDH1-209ENST00000566510 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
CDH1-209ENST00000566510 ISY1Q9ULR0 285 aaKnown RBP17.57■□□□□ 0.4
CDH1-209ENST00000566510 KIF24Q5T7B8 1368 aa17.56■□□□□ 0.4
CDH1-209ENST00000566510 BAG4O95429 457 aaKnown RBP17.55■□□□□ 0.4
CDH1-209ENST00000566510 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
CDH1-209ENST00000566510 ACEP12821 1306 aa17.55■□□□□ 0.4
CDH1-209ENST00000566510 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
CDH1-209ENST00000566510 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
CDH1-209ENST00000566510 F6X3S4 739 aa17.55■□□□□ 0.4
CDH1-209ENST00000566510 CLCN1P35523 988 aa17.55■□□□□ 0.4
CDH1-209ENST00000566510 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 FOXO3O43524 673 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
CDH1-209ENST00000566510 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
CDH1-209ENST00000566510 PTPRCP08575 1304 aa17.53■□□□□ 0.4
CDH1-209ENST00000566510 NRXN3Q9Y4C0 1643 aa17.53■□□□□ 0.4
CDH1-209ENST00000566510 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
CDH1-209ENST00000566510 ESPNB1AK53 854 aa17.53■□□□□ 0.4
CDH1-209ENST00000566510 ST18O60284 1047 aa17.53■□□□□ 0.4
CDH1-209ENST00000566510 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
CDH1-209ENST00000566510 RGS12O14924 1447 aa17.52■□□□□ 0.4
CDH1-209ENST00000566510 PKP1Q13835 747 aa17.52■□□□□ 0.4
CDH1-209ENST00000566510 REREQ9P2R6 1566 aa17.52■□□□□ 0.39
CDH1-209ENST00000566510 HMMRO75330 724 aa17.52■□□□□ 0.39
CDH1-209ENST00000566510 G2E3Q7L622 706 aa17.52■□□□□ 0.39
CDH1-209ENST00000566510 NUCB2P80303 420 aa17.51■□□□□ 0.39
CDH1-209ENST00000566510 C3P01024 1663 aa17.51■□□□□ 0.39
CDH1-209ENST00000566510 REC8O95072 547 aa17.51■□□□□ 0.39
CDH1-209ENST00000566510 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
CDH1-209ENST00000566510 ANP32BQ92688 251 aaKnown RBP17.5■□□□□ 0.39
CDH1-209ENST00000566510 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
CDH1-209ENST00000566510 NASPP49321 788 aaPredicted RBP17.49■□□□□ 0.39
CDH1-209ENST00000566510 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
CDH1-209ENST00000566510 MTHFSDQ2M296 383 aaKnown RBP17.49■□□□□ 0.39
CDH1-209ENST00000566510 CAVIN1Q6NZI2 390 aaKnown RBP17.49■□□□□ 0.39
CDH1-209ENST00000566510 ERC2O15083 957 aa17.48■□□□□ 0.39
CDH1-209ENST00000566510 FOXD4L5Q5VV16 416 aaPredicted RBP17.48■□□□□ 0.39
CDH1-209ENST00000566510 FOXD4L4Q8WXT5 416 aaPredicted RBP17.48■□□□□ 0.39
CDH1-209ENST00000566510 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
CDH1-209ENST00000566510 AGLP35573 1532 aa17.48■□□□□ 0.39
CDH1-209ENST00000566510 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
CDH1-209ENST00000566510 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
CDH1-209ENST00000566510 PDE1AP54750 535 aa17.46■□□□□ 0.39
CDH1-209ENST00000566510 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
CDH1-209ENST00000566510 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
CDH1-209ENST00000566510 PRPF40AO75400 957 aaKnown RBP17.45■□□□□ 0.38
CDH1-209ENST00000566510 AMPHP49418 695 aa17.45■□□□□ 0.38
CDH1-209ENST00000566510 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
CDH1-209ENST00000566510 CWC22Q9HCG8 908 aaKnown RBP17.45■□□□□ 0.38
CDH1-209ENST00000566510 GNAI2P04899 355 aa17.45■□□□□ 0.38
CDH1-209ENST00000566510 NEK4P51957 841 aa17.45■□□□□ 0.38
CDH1-209ENST00000566510 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
CDH1-209ENST00000566510 CRB1P82279 1406 aa17.45■□□□□ 0.38
CDH1-209ENST00000566510 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 NOL8Q76FK4 1167 aaKnown RBP17.44■□□□□ 0.38
CDH1-209ENST00000566510 TECPR2O15040 1411 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
CDH1-209ENST00000566510 CCDC173Q0VFZ6 552 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
CDH1-209ENST00000566510 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 USP6P35125 1406 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
CDH1-209ENST00000566510 TNRQ92752 1358 aa17.42■□□□□ 0.38
CDH1-209ENST00000566510 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
CDH1-209ENST00000566510 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
CDH1-209ENST00000566510 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
CDH1-209ENST00000566510 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
CDH1-209ENST00000566510 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
CDH1-209ENST00000566510 EYA1Q99502 592 aa17.41■□□□□ 0.38
CDH1-209ENST00000566510 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
CDH1-209ENST00000566510 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
CDH1-209ENST00000566510 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms