RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
LSM3P5-201ENST00000566307 NHSL1Q5SYE7 1610 aa11.47□□□□□ -0.57
LSM3P5-201ENST00000566307 NUTM2GQ5VZR2 741 aa11.47□□□□□ -0.57
LSM3P5-201ENST00000566307 BRINP3Q76B58 766 aa11.47□□□□□ -0.57
LSM3P5-201ENST00000566307 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
LSM3P5-201ENST00000566307 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
LSM3P5-201ENST00000566307 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
LSM3P5-201ENST00000566307 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
LSM3P5-201ENST00000566307 SLAIN2Q9P270 581 aa11.46□□□□□ -0.57
LSM3P5-201ENST00000566307 COL18A1P39060 1754 aa11.46□□□□□ -0.58
LSM3P5-201ENST00000566307 SOX12O15370 315 aa11.45□□□□□ -0.58
LSM3P5-201ENST00000566307 BABAM1Q9NWV8 329 aa11.45□□□□□ -0.58
LSM3P5-201ENST00000566307 CRB1P82279 1406 aa11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 KIAA0232Q92628 1395 aa11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 MS4A1P11836 297 aa11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 LTBP4Q8N2S1 1624 aa11.44□□□□□ -0.58
LSM3P5-201ENST00000566307 OVOS2A0A0G2JMS6 1433 aa11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 CHL1O00533 1208 aa11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 BCAR3O75815 825 aa11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 EXOC6Q8TAG9 804 aa11.43□□□□□ -0.58
LSM3P5-201ENST00000566307 SOS1Q07889 1333 aaPredicted RBP11.42□□□□□ -0.58
LSM3P5-201ENST00000566307 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
LSM3P5-201ENST00000566307 TSR2Q969E8 191 aaKnown RBP11.42□□□□□ -0.58
LSM3P5-201ENST00000566307 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
LSM3P5-201ENST00000566307 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 ERBB3P21860 1342 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 KIF16BQ96L93 1317 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 PLIN1O60240 522 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
LSM3P5-201ENST00000566307 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 ABCA3Q99758 1704 aa11.4□□□□□ -0.58
LSM3P5-201ENST00000566307 CEMIPQ8WUJ3 1361 aa11.4□□□□□ -0.59
LSM3P5-201ENST00000566307 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.59
LSM3P5-201ENST00000566307 VAMP4O75379 141 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 B4GALNT3Q6L9W6 998 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
LSM3P5-201ENST00000566307 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
LSM3P5-201ENST00000566307 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
LSM3P5-201ENST00000566307 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
LSM3P5-201ENST00000566307 SMC4Q9NTJ3 1288 aa11.37□□□□□ -0.59
LSM3P5-201ENST00000566307 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
LSM3P5-201ENST00000566307 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 DDX17Q92841 729 aaKnown RBP11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
LSM3P5-201ENST00000566307 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 MCM10Q7L590 875 aa11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 DZIP1LQ8IYY4 767 aaKnown RBP11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
LSM3P5-201ENST00000566307 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 ROBO1Q9Y6N7 1651 aa11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 ZC3H6P61129 1189 aaKnown RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 CHMP4BQ9H444 224 aaKnown RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 LAS1LQ9Y4W2 734 aaKnown RBP11.34□□□□□ -0.59
LSM3P5-201ENST00000566307 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.59
LSM3P5-201ENST00000566307 HOXB7P09629 217 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 TRIM27P14373 513 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 TSPYL6Q8N831 410 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
LSM3P5-201ENST00000566307 USHBP1Q8N6Y0 703 aa11.32□□□□□ -0.6
LSM3P5-201ENST00000566307 API5Q9BZZ5 524 aaKnown RBP11.32□□□□□ -0.6
LSM3P5-201ENST00000566307 NOB1Q9ULX3 412 aaKnown RBP11.32□□□□□ -0.6
LSM3P5-201ENST00000566307 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
LSM3P5-201ENST00000566307 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms