RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 GTF2IP78347 998 aa10.66□□□□□ -0.7
KARS-206ENST00000566249 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
KARS-206ENST00000566249 ATP1A2P50993 1020 aa10.65□□□□□ -0.7
KARS-206ENST00000566249 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
KARS-206ENST00000566249 OGFOD1Q8N543 542 aa10.65□□□□□ -0.7
KARS-206ENST00000566249 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
KARS-206ENST00000566249 GFRA3O60609 400 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 ATG7O95352 703 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 TIMP2P16035 220 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
KARS-206ENST00000566249 CLDN10P78369 228 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
KARS-206ENST00000566249 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
KARS-206ENST00000566249 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L21D6R901 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 PSME1Q06323 249 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
KARS-206ENST00000566249 ARXQ96QS3 562 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 PCDHGA11Q9Y5H2 935 aa10.63□□□□□ -0.71
KARS-206ENST00000566249 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
KARS-206ENST00000566249 CBLBQ13191 982 aa10.62□□□□□ -0.71
KARS-206ENST00000566249 ZNF594Q96JF6 807 aaPredicted RBP10.62□□□□□ -0.71
KARS-206ENST00000566249 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
KARS-206ENST00000566249 PTK7Q13308 1070 aa10.61□□□□□ -0.71
KARS-206ENST00000566249 LARGE2Q8N3Y3 721 aa10.61□□□□□ -0.71
KARS-206ENST00000566249 KIAA1024Q9UPX6 916 aa10.61□□□□□ -0.71
KARS-206ENST00000566249 ZBTB7BO15156 539 aaPredicted RBP10.6□□□□□ -0.71
KARS-206ENST00000566249 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
KARS-206ENST00000566249 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
KARS-206ENST00000566249 ADH1AP07327 375 aa10.59□□□□□ -0.71
KARS-206ENST00000566249 PKDCCQ504Y2 493 aa10.59□□□□□ -0.71
KARS-206ENST00000566249 NOVA2Q9UNW9 492 aaKnown RBP10.59□□□□□ -0.71
KARS-206ENST00000566249 CAPN5O15484 640 aaPredicted RBP10.58□□□□□ -0.72
KARS-206ENST00000566249 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 ELOAQ14241 798 aaKnown RBP10.58□□□□□ -0.72
KARS-206ENST00000566249 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 Q6ZVU0 165 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
KARS-206ENST00000566249 DGAT1O75907 488 aa10.57□□□□□ -0.72
KARS-206ENST00000566249 DPYDQ12882 1025 aa10.57□□□□□ -0.72
KARS-206ENST00000566249 SIX5Q8N196 739 aa10.57□□□□□ -0.72
KARS-206ENST00000566249 ZMIZ1Q9ULJ6 1067 aa10.57□□□□□ -0.72
KARS-206ENST00000566249 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
KARS-206ENST00000566249 STAU1O95793 577 aaKnown RBP10.56□□□□□ -0.72
KARS-206ENST00000566249 AVPP01185 164 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 FAM200AQ8TCP9 573 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 STK32AQ8WU08 396 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
KARS-206ENST00000566249 GNRH1P01148 92 aa10.55□□□□□ -0.72
KARS-206ENST00000566249 GDF10P55107 478 aa10.55□□□□□ -0.72
KARS-206ENST00000566249 ARHGEF10LQ9HCE6 1279 aa10.55□□□□□ -0.72
KARS-206ENST00000566249 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
KARS-206ENST00000566249 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
KARS-206ENST00000566249 DKK1O94907 266 aa10.54□□□□□ -0.72
KARS-206ENST00000566249 SCNN1DP51172 638 aa10.54□□□□□ -0.72
KARS-206ENST00000566249 RELBQ01201 579 aa10.54□□□□□ -0.72
KARS-206ENST00000566249 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
KARS-206ENST00000566249 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
KARS-206ENST00000566249 TMEM229AB2RXF0 380 aa10.53□□□□□ -0.72
KARS-206ENST00000566249 PTGIRP43119 386 aa10.53□□□□□ -0.72
KARS-206ENST00000566249 SEC13P55735 322 aa10.53□□□□□ -0.72
KARS-206ENST00000566249 TMEM164Q5U3C3 297 aa10.53□□□□□ -0.72
KARS-206ENST00000566249 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.53□□□□□ -0.72
KARS-206ENST00000566249 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
KARS-206ENST00000566249 CTC1Q2NKJ3 1217 aa10.52□□□□□ -0.73
KARS-206ENST00000566249 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
KARS-206ENST00000566249 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
KARS-206ENST00000566249 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
KARS-206ENST00000566249 INHAP05111 366 aa10.51□□□□□ -0.73
KARS-206ENST00000566249 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
KARS-206ENST00000566249 ZNF395Q9H8N7 513 aaPredicted RBP10.51□□□□□ -0.73
KARS-206ENST00000566249 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
KARS-206ENST00000566249 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
KARS-206ENST00000566249 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
KARS-206ENST00000566249 MEN1O00255 615 aa10.5□□□□□ -0.73
KARS-206ENST00000566249 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
KARS-206ENST00000566249 AXIN1O15169 862 aa10.5□□□□□ -0.73
KARS-206ENST00000566249 UPP2O95045 317 aa10.5□□□□□ -0.73
KARS-206ENST00000566249 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
KARS-206ENST00000566249 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
KARS-206ENST00000566249 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
KARS-206ENST00000566249 IL2RAP01589 272 aa10.49□□□□□ -0.73
KARS-206ENST00000566249 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
KARS-206ENST00000566249 BACH1O14867 736 aa10.48□□□□□ -0.73
KARS-206ENST00000566249 PDE4CQ08493 712 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms