RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 TMPOP42166 694 aaKnown RBP8.15□□□□□ -1.1
CHD9-217ENST00000565832 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
CHD9-217ENST00000565832 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.1
CHD9-217ENST00000565832 MAP3K19Q56UN5 1328 aa8.15□□□□□ -1.1
CHD9-217ENST00000565832 ADGRL3Q9HAR2 1447 aa8.15□□□□□ -1.1
CHD9-217ENST00000565832 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.11
CHD9-217ENST00000565832 RIPK4P57078 832 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.11
CHD9-217ENST00000565832 B4GALNT3Q6L9W6 998 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 TMEM94Q12767 1356 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 AATKQ6ZMQ8 1374 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 LMTK3Q96Q04 1460 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 OVOS2A0A0J9YW53 1432 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 OVOS2Q6IE36 1432 aa8.15□□□□□ -1.11
CHD9-217ENST00000565832 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
CHD9-217ENST00000565832 HAX1O00165 279 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 FCHSD2O94868 740 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 EVX2Q03828 476 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 C20orf194Q5TEA3 1177 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
CHD9-217ENST00000565832 TTC21AQ8NDW8 1320 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 ZNF335Q9H4Z2 1342 aaPredicted RBP8.14□□□□□ -1.11
CHD9-217ENST00000565832 BCAR3O75815 825 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 RRP1P56182 461 aaKnown RBP8.14□□□□□ -1.11
CHD9-217ENST00000565832 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 TSR2Q969E8 191 aaKnown RBP8.14□□□□□ -1.11
CHD9-217ENST00000565832 ANKARQ7Z5J8 1434 aa8.14□□□□□ -1.11
CHD9-217ENST00000565832 STRCQ7RTU9 1775 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 ZBTB7CA1YPR0 619 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 ATF3P18847 181 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 SULT6B1Q6IMI4 303 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 LTV1Q96GA3 475 aaPredicted RBP8.13□□□□□ -1.11
CHD9-217ENST00000565832 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 PIK3C2AO00443 1686 aa8.13□□□□□ -1.11
CHD9-217ENST00000565832 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 E9PSI1 815 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 AMPHP49418 695 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 EXOC6Q8TAG9 804 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 IQSEC2Q5JU85 1478 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
CHD9-217ENST00000565832 CAMK2BQ13554 666 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 DCTN1Q14203 1278 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 KRT28Q7Z3Y7 464 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 C1orf167Q5SNV9 1468 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 CCDC27Q2M243 656 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
CHD9-217ENST00000565832 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
CHD9-217ENST00000565832 CDK12Q9NYV4 1490 aaPredicted RBP8.1□□□□□ -1.11
CHD9-217ENST00000565832 LRRC7Q96NW7 1537 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 HOXC9P31274 260 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 EYA1Q99502 592 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
CHD9-217ENST00000565832 NWD1Q149M9 1564 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 NGEFQ8N5V2 710 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
CHD9-217ENST00000565832 ZC3H15Q8WU90 426 aaKnown RBP8.1□□□□□ -1.11
CHD9-217ENST00000565832 GPHNQ9NQX3 736 aaPredicted RBP8.1□□□□□ -1.11
CHD9-217ENST00000565832 GCP02774 474 aa8.09□□□□□ -1.11
CHD9-217ENST00000565832 ATN1P54259 1190 aaPredicted RBP8.09□□□□□ -1.11
CHD9-217ENST00000565832 NFE2L2Q16236 605 aa8.09□□□□□ -1.11
CHD9-217ENST00000565832 PDCD7Q8N8D1 485 aaKnown RBP8.09□□□□□ -1.11
CHD9-217ENST00000565832 MARF1Q9Y4F3 1742 aaKnown RBP8.09□□□□□ -1.11
CHD9-217ENST00000565832 ZC3H6P61129 1189 aaKnown RBP8.08□□□□□ -1.12
CHD9-217ENST00000565832 MICALL2Q8IY33 904 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 CRBNQ96SW2 442 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
CHD9-217ENST00000565832 AXIN2Q9Y2T1 843 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 NEFMP07197 916 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 EXOSC9Q06265 439 aaKnown RBP8.08□□□□□ -1.12
CHD9-217ENST00000565832 MCM10Q7L590 875 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 TNNQ9UQP3 1299 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 FANCIQ9NVI1 1328 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 MST1RQ04912 1400 aa8.08□□□□□ -1.12
CHD9-217ENST00000565832 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
CHD9-217ENST00000565832 FLT4P35916 1363 aa8.07□□□□□ -1.12
CHD9-217ENST00000565832 FRAT1Q92837 279 aaPredicted RBP8.07□□□□□ -1.12
CHD9-217ENST00000565832 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
CHD9-217ENST00000565832 XIRP1Q702N8 1843 aaKnown RBP8.07□□□□□ -1.12
CHD9-217ENST00000565832 RARSP54136 660 aaKnown RBP8.07□□□□□ -1.12
CHD9-217ENST00000565832 NBPF6Q5VWK0 638 aa8.07□□□□□ -1.12
CHD9-217ENST00000565832 ERICH6BQ5W0A0 696 aa8.07□□□□□ -1.12
CHD9-217ENST00000565832 NBPF4Q96M43 638 aa8.07□□□□□ -1.12
CHD9-217ENST00000565832 SLAIN2Q9P270 581 aa8.07□□□□□ -1.12
CHD9-217ENST00000565832 MSH6P52701 1360 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 DLG5Q8TDM6 1919 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 DSG2Q14126 1118 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 MTHFSDQ2M296 383 aaKnown RBP8.06□□□□□ -1.12
CHD9-217ENST00000565832 BRINP3Q76B58 766 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 MIS18AQ9NYP9 233 aa8.06□□□□□ -1.12
CHD9-217ENST00000565832 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms