RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-212ENST00000565517 CAMKK2Q96RR4 588 aa20.97■□□□□ 0.95
COMMD4-212ENST00000565517 RGPD3A6NKT7 1758 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-212ENST00000565517 RGPD4Q7Z3J3 1758 aa20.96■□□□□ 0.95
COMMD4-212ENST00000565517 DDX54Q8TDD1 881 aaKnown RBP20.96■□□□□ 0.95
COMMD4-212ENST00000565517 NHSQ6T4R5 1651 aa20.96■□□□□ 0.95
COMMD4-212ENST00000565517 PLSCR1O15162 318 aa20.95■□□□□ 0.94
COMMD4-212ENST00000565517 EZH2Q15910 746 aaKnown RBP20.94■□□□□ 0.94
COMMD4-212ENST00000565517 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
COMMD4-212ENST00000565517 MTHFSP49914 203 aa20.93■□□□□ 0.94
COMMD4-212ENST00000565517 IGSF1Q8N6C5 1336 aa20.93■□□□□ 0.94
COMMD4-212ENST00000565517 PLEKHG2Q9H7P9 1386 aa20.93■□□□□ 0.94
COMMD4-212ENST00000565517 RREB1Q92766 1687 aa20.93■□□□□ 0.94
COMMD4-212ENST00000565517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.92■□□□□ 0.94
COMMD4-212ENST00000565517 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
COMMD4-212ENST00000565517 PCDH11XQ9BZA7 1347 aa20.91■□□□□ 0.94
COMMD4-212ENST00000565517 PCDH11YQ9BZA8 1340 aa20.91■□□□□ 0.94
COMMD4-212ENST00000565517 KCNQ2O43526 872 aa20.9■□□□□ 0.94
COMMD4-212ENST00000565517 ACSBG1Q96GR2 724 aa20.9■□□□□ 0.94
COMMD4-212ENST00000565517 IL13P35225 146 aa20.89■□□□□ 0.93
COMMD4-212ENST00000565517 SPG7Q9UQ90 795 aa20.89■□□□□ 0.93
COMMD4-212ENST00000565517 BTAF1O14981 1849 aa20.89■□□□□ 0.93
COMMD4-212ENST00000565517 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
COMMD4-212ENST00000565517 DOT1LQ8TEK3 1739 aa20.87■□□□□ 0.93
COMMD4-212ENST00000565517 CYP27B1O15528 508 aa20.86■□□□□ 0.93
COMMD4-212ENST00000565517 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-212ENST00000565517 KDRP35968 1356 aa20.85■□□□□ 0.93
COMMD4-212ENST00000565517 DIAPH1O60610 1272 aaKnown RBP20.84■□□□□ 0.93
COMMD4-212ENST00000565517 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
COMMD4-212ENST00000565517 NKX1-1Q15270 411 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-212ENST00000565517 PROM2Q8N271 834 aa20.83■□□□□ 0.93
COMMD4-212ENST00000565517 NBPF14Q5TI25 921 aa20.82■□□□□ 0.92
COMMD4-212ENST00000565517 SULT6B1Q6IMI4 303 aa20.82■□□□□ 0.92
COMMD4-212ENST00000565517 ITGB4P16144 1822 aa20.81■□□□□ 0.92
COMMD4-212ENST00000565517 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
COMMD4-212ENST00000565517 PLEKHO1Q53GL0 409 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-212ENST00000565517 IFNL2Q8IZJ0 200 aa20.81■□□□□ 0.92
COMMD4-212ENST00000565517 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-212ENST00000565517 PPP2R1AP30153 589 aa20.8■□□□□ 0.92
COMMD4-212ENST00000565517 TXNRD1Q16881 649 aa20.8■□□□□ 0.92
COMMD4-212ENST00000565517 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
COMMD4-212ENST00000565517 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-212ENST00000565517 PHKG2P15735 406 aa20.79■□□□□ 0.92
COMMD4-212ENST00000565517 CFAP53Q96M91 514 aa20.79■□□□□ 0.92
COMMD4-212ENST00000565517 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
COMMD4-212ENST00000565517 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
COMMD4-212ENST00000565517 LY75O60449 1722 aa20.78■□□□□ 0.92
COMMD4-212ENST00000565517 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
COMMD4-212ENST00000565517 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
COMMD4-212ENST00000565517 R3HDM1Q15032 1099 aaKnown RBP20.76■□□□□ 0.91
COMMD4-212ENST00000565517 SLC27A3Q5K4L6 730 aa20.74■□□□□ 0.91
COMMD4-212ENST00000565517 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
COMMD4-212ENST00000565517 HMOX1P09601 288 aa20.73■□□□□ 0.91
COMMD4-212ENST00000565517 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
COMMD4-212ENST00000565517 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
COMMD4-212ENST00000565517 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
COMMD4-212ENST00000565517 RALBP1Q15311 655 aa20.72■□□□□ 0.91
COMMD4-212ENST00000565517 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
COMMD4-212ENST00000565517 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
COMMD4-212ENST00000565517 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
COMMD4-212ENST00000565517 PIGBQ92521 554 aa20.71■□□□□ 0.91
COMMD4-212ENST00000565517 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
COMMD4-212ENST00000565517 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-212ENST00000565517 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-212ENST00000565517 LRRC4BQ9NT99 713 aa20.7■□□□□ 0.9
COMMD4-212ENST00000565517 HMGB2P26583 209 aaKnown RBP20.69■□□□□ 0.9
COMMD4-212ENST00000565517 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
COMMD4-212ENST00000565517 TMOD3Q9NYL9 352 aa20.69■□□□□ 0.9
COMMD4-212ENST00000565517 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
COMMD4-212ENST00000565517 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
COMMD4-212ENST00000565517 AKAP4Q5JQC9 854 aa20.68■□□□□ 0.9
COMMD4-212ENST00000565517 VIRMAQ69YN4 1812 aaKnown RBP20.68■□□□□ 0.9
COMMD4-212ENST00000565517 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-212ENST00000565517 LRP5O75197 1615 aa20.67■□□□□ 0.9
COMMD4-212ENST00000565517 CCNL1Q9UK58 526 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-212ENST00000565517 PALLDQ8WX93 1383 aa20.66■□□□□ 0.9
COMMD4-212ENST00000565517 TAF1LQ8IZX4 1826 aa20.65■□□□□ 0.9
COMMD4-212ENST00000565517 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
COMMD4-212ENST00000565517 CASZ1Q86V15 1759 aa20.64■□□□□ 0.9
COMMD4-212ENST00000565517 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
COMMD4-212ENST00000565517 FCHSD2O94868 740 aa20.64■□□□□ 0.89
COMMD4-212ENST00000565517 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
COMMD4-212ENST00000565517 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-212ENST00000565517 U2AF1L5P0DN76 240 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-212ENST00000565517 CABP4P57796 275 aa20.63■□□□□ 0.89
COMMD4-212ENST00000565517 U2AF1Q01081 240 aaKnown RBP eCLIP20.63■□□□□ 0.89
COMMD4-212ENST00000565517 AKT1S1Q96B36 256 aa20.63■□□□□ 0.89
COMMD4-212ENST00000565517 C5P01031 1676 aa20.62■□□□□ 0.89
COMMD4-212ENST00000565517 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
COMMD4-212ENST00000565517 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
COMMD4-212ENST00000565517 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
COMMD4-212ENST00000565517 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
COMMD4-212ENST00000565517 PRKAR2BP31323 418 aa20.61■□□□□ 0.89
COMMD4-212ENST00000565517 KCNQ4P56696 695 aa20.61■□□□□ 0.89
COMMD4-212ENST00000565517 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
COMMD4-212ENST00000565517 ZNF827Q17R98 1081 aa20.6■□□□□ 0.89
COMMD4-212ENST00000565517 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
COMMD4-212ENST00000565517 LOC102724428A0A0B4J2F2 783 aa20.59■□□□□ 0.89
COMMD4-212ENST00000565517 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
COMMD4-212ENST00000565517 SIK1P57059 783 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms