RNA–Protein interactions for RNA: ENST00000565071.1

CTU2-207, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-207ENST00000565071 DEFB132Q7Z7B7 95 aa29.3■■■□□ 2.28
CTU2-207ENST00000565071 DDX54Q8TDD1 881 aaKnown RBP29.3■■■□□ 2.28
CTU2-207ENST00000565071 PLEKHG2Q9H7P9 1386 aa29.29■■■□□ 2.28
CTU2-207ENST00000565071 PKD1L3Q7Z443 1732 aa29.29■■■□□ 2.28
CTU2-207ENST00000565071 PARD3Q8TEW0 1356 aa29.28■■■□□ 2.28
CTU2-207ENST00000565071 COL3A1P02461 1466 aaPredicted RBP29.28■■■□□ 2.28
CTU2-207ENST00000565071 PPP2R1AP30153 589 aa29.27■■■□□ 2.28
CTU2-207ENST00000565071 BCL11BQ9C0K0 894 aaPredicted RBP29.27■■■□□ 2.28
CTU2-207ENST00000565071 PCDH11XQ9BZA7 1347 aa29.26■■■□□ 2.27
CTU2-207ENST00000565071 PCDH11YQ9BZA8 1340 aa29.26■■■□□ 2.27
CTU2-207ENST00000565071 DIAPH1O60610 1272 aaKnown RBP29.26■■■□□ 2.27
CTU2-207ENST00000565071 NHSQ6T4R5 1651 aa29.25■■■□□ 2.27
CTU2-207ENST00000565071 APBA3O96018 575 aa29.25■■■□□ 2.27
CTU2-207ENST00000565071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.25■■■□□ 2.27
CTU2-207ENST00000565071 KDRP35968 1356 aa29.24■■■□□ 2.27
CTU2-207ENST00000565071 SPG7Q9UQ90 795 aa29.23■■■□□ 2.27
CTU2-207ENST00000565071 ZNF316A6NFI3 1004 aaPredicted RBP29.22■■■□□ 2.27
CTU2-207ENST00000565071 EN1Q05925 392 aaPredicted RBP29.22■■■□□ 2.27
CTU2-207ENST00000565071 AEBP1Q8IUX7 1158 aa29.22■■■□□ 2.27
CTU2-207ENST00000565071 CFAP53Q96M91 514 aa29.22■■■□□ 2.27
CTU2-207ENST00000565071 SULT6B1Q6IMI4 303 aa29.21■■■□□ 2.27
CTU2-207ENST00000565071 PTF1AQ7RTS3 328 aa29.2■■■□□ 2.26
CTU2-207ENST00000565071 ACSBG1Q96GR2 724 aa29.2■■■□□ 2.26
CTU2-207ENST00000565071 KAT6BQ8WYB5 2073 aa29.19■■■□□ 2.26
CTU2-207ENST00000565071 RGPD3A6NKT7 1758 aaPredicted RBP29.18■■■□□ 2.26
CTU2-207ENST00000565071 RGPD4Q7Z3J3 1758 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 DOT1LQ8TEK3 1739 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 CYP27B1O15528 508 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 KCNQ2O43526 872 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 RALBP1Q15311 655 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 CAMKK2Q96RR4 588 aa29.18■■■□□ 2.26
CTU2-207ENST00000565071 EZH2Q15910 746 aaKnown RBP29.15■■■□□ 2.26
CTU2-207ENST00000565071 PLSCR1O15162 318 aa29.14■■■□□ 2.26
CTU2-207ENST00000565071 AMOTQ4VCS5 1084 aa29.14■■■□□ 2.26
CTU2-207ENST00000565071 PLEKHO1Q53GL0 409 aaPredicted RBP29.14■■■□□ 2.26
CTU2-207ENST00000565071 BTAF1O14981 1849 aa29.13■■■□□ 2.25
CTU2-207ENST00000565071 RREB1Q92766 1687 aa29.12■■■□□ 2.25
CTU2-207ENST00000565071 U2SURPO15042 1029 aaKnown RBP29.12■■■□□ 2.25
CTU2-207ENST00000565071 HMOX1P09601 288 aa29.12■■■□□ 2.25
CTU2-207ENST00000565071 NKX1-1Q15270 411 aaPredicted RBP29.12■■■□□ 2.25
CTU2-207ENST00000565071 IFNL2Q8IZJ0 200 aa29.12■■■□□ 2.25
CTU2-207ENST00000565071 PHKG2P15735 406 aa29.11■■■□□ 2.25
CTU2-207ENST00000565071 PRIM1P49642 420 aaKnown RBP29.11■■■□□ 2.25
CTU2-207ENST00000565071 NUDCQ9Y266 331 aa29.1■■■□□ 2.25
CTU2-207ENST00000565071 SYTL4Q96C24 671 aaPredicted RBP29.09■■■□□ 2.25
CTU2-207ENST00000565071 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
CTU2-207ENST00000565071 ZNF530Q6P9A1 599 aaPredicted RBP29.07■■■□□ 2.24
CTU2-207ENST00000565071 NUP188Q5SRE5 1749 aa29.06■■■□□ 2.24
CTU2-207ENST00000565071 MYBBP1AQ9BQG0 1328 aaKnown RBP29.05■■■□□ 2.24
CTU2-207ENST00000565071 HSP90AB1P08238 724 aaKnown RBP29.05■■■□□ 2.24
CTU2-207ENST00000565071 ITGB4P16144 1822 aa29.04■■■□□ 2.24
CTU2-207ENST00000565071 C1orf141Q5JVX7 400 aa29.03■■■□□ 2.24
CTU2-207ENST00000565071 PRKRIP1Q9H875 184 aaPredicted RBP29.02■■■□□ 2.24
CTU2-207ENST00000565071 U2AF1L5P0DN76 240 aaPredicted RBP29.01■■■□□ 2.23
CTU2-207ENST00000565071 U2AF1Q01081 240 aaKnown RBP eCLIP29.01■■■□□ 2.23
CTU2-207ENST00000565071 PROM2Q8N271 834 aa29.01■■■□□ 2.23
CTU2-207ENST00000565071 TXNRD1Q16881 649 aa29■■■□□ 2.23
CTU2-207ENST00000565071 DCAF5Q96JK2 942 aa29■■■□□ 2.23
CTU2-207ENST00000565071 RSPH6AQ9H0K4 717 aa29■■■□□ 2.23
CTU2-207ENST00000565071 MPRIPQ6WCQ1 1025 aa28.99■■■□□ 2.23
CTU2-207ENST00000565071 KDM6AO15550 1401 aaPredicted RBP28.98■■■□□ 2.23
CTU2-207ENST00000565071 MTHFSDQ2M296 383 aaKnown RBP28.97■■■□□ 2.23
CTU2-207ENST00000565071 AKAP4Q5JQC9 854 aa28.97■■■□□ 2.23
CTU2-207ENST00000565071 ERVV-2B6SEH9 535 aa28.96■■■□□ 2.23
CTU2-207ENST00000565071 FCHSD2O94868 740 aa28.96■■■□□ 2.23
CTU2-207ENST00000565071 PRKAR2BP31323 418 aa28.96■■■□□ 2.23
CTU2-207ENST00000565071 TMOD3Q9NYL9 352 aa28.96■■■□□ 2.23
CTU2-207ENST00000565071 LY75O60449 1722 aa28.96■■■□□ 2.23
CTU2-207ENST00000565071 NBPF14Q5TI25 921 aa28.95■■■□□ 2.22
CTU2-207ENST00000565071 PIGBQ92521 554 aa28.95■■■□□ 2.22
CTU2-207ENST00000565071 SLC27A3Q5K4L6 730 aa28.93■■■□□ 2.22
CTU2-207ENST00000565071 GAS2L2Q8NHY3 880 aa28.93■■■□□ 2.22
CTU2-207ENST00000565071 SCN11AQ9UI33 1791 aa28.93■■■□□ 2.22
CTU2-207ENST00000565071 SMARCC1Q92922 1105 aaPredicted RBP28.91■■■□□ 2.22
CTU2-207ENST00000565071 PALLDQ8WX93 1383 aa28.9■■■□□ 2.22
CTU2-207ENST00000565071 PHACTR3Q96KR7 559 aa28.9■■■□□ 2.22
CTU2-207ENST00000565071 R3HDM1Q15032 1099 aaKnown RBP28.89■■■□□ 2.22
CTU2-207ENST00000565071 PAPPAQ13219 1627 aa28.89■■■□□ 2.22
CTU2-207ENST00000565071 ADAMTS7Q9UKP4 1686 aa28.89■■■□□ 2.21
CTU2-207ENST00000565071 PSDA5PKW4 1024 aaPredicted RBP28.88■■■□□ 2.21
CTU2-207ENST00000565071 CABP4P57796 275 aa28.88■■■□□ 2.21
CTU2-207ENST00000565071 LRRC4BQ9NT99 713 aa28.88■■■□□ 2.21
CTU2-207ENST00000565071 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
CTU2-207ENST00000565071 VIRMAQ69YN4 1812 aaKnown RBP28.87■■■□□ 2.21
CTU2-207ENST00000565071 ANO8Q9HCE9 1232 aaPredicted RBP28.87■■■□□ 2.21
CTU2-207ENST00000565071 CCNL1Q9UK58 526 aaPredicted RBP28.86■■■□□ 2.21
CTU2-207ENST00000565071 MRC1P22897 1456 aa28.85■■■□□ 2.21
CTU2-207ENST00000565071 RNMTO43148 476 aaKnown RBP28.85■■■□□ 2.21
CTU2-207ENST00000565071 GNAT3A8MTJ3 354 aa28.84■■■□□ 2.21
CTU2-207ENST00000565071 PNNQ9H307 717 aaKnown RBP28.84■■■□□ 2.21
CTU2-207ENST00000565071 LGR6Q9HBX8 967 aa28.84■■■□□ 2.21
CTU2-207ENST00000565071 STK32BQ9NY57 414 aa28.84■■■□□ 2.21
CTU2-207ENST00000565071 ASAP1Q9ULH1 1129 aa28.84■■■□□ 2.21
CTU2-207ENST00000565071 ATG3Q9NT62 314 aa28.83■■■□□ 2.21
CTU2-207ENST00000565071 ANP32CO43423 234 aa28.82■■■□□ 2.2
CTU2-207ENST00000565071 NEFMP07197 916 aa28.82■■■□□ 2.2
CTU2-207ENST00000565071 NFATC2IPQ8NCF5 419 aa28.82■■■□□ 2.2
CTU2-207ENST00000565071 SLC52A2Q9HAB3 445 aa28.82■■■□□ 2.2
CTU2-207ENST00000565071 KCNQ4P56696 695 aa28.81■■■□□ 2.2
CTU2-207ENST00000565071 PLEKHF1Q96S99 279 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms