RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
NSMCE1-208ENST00000565070 VPS72Q15906 364 aa16.52■□□□□ 0.23
NSMCE1-208ENST00000565070 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.23
NSMCE1-208ENST00000565070 E9PSI1 815 aa16.51■□□□□ 0.23
NSMCE1-208ENST00000565070 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
NSMCE1-208ENST00000565070 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
NSMCE1-208ENST00000565070 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 AEBP1Q8IUX7 1158 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 RAPGEF4Q8WZA2 1011 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 SPATA31A5Q5VU36 1347 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 SPATA31A7Q8IWB4 1347 aa16.5■□□□□ 0.23
NSMCE1-208ENST00000565070 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
NSMCE1-208ENST00000565070 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
NSMCE1-208ENST00000565070 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
NSMCE1-208ENST00000565070 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
NSMCE1-208ENST00000565070 TATP17735 454 aaPredicted RBP16.48■□□□□ 0.23
NSMCE1-208ENST00000565070 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
NSMCE1-208ENST00000565070 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
NSMCE1-208ENST00000565070 ATRNO75882 1429 aa16.48■□□□□ 0.23
NSMCE1-208ENST00000565070 IL2RBP14784 551 aa16.47■□□□□ 0.23
NSMCE1-208ENST00000565070 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
NSMCE1-208ENST00000565070 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
NSMCE1-208ENST00000565070 USP35Q9P2H5 1018 aa16.46■□□□□ 0.23
NSMCE1-208ENST00000565070 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.22
NSMCE1-208ENST00000565070 BARGINQ6ZT62 677 aa16.46■□□□□ 0.22
NSMCE1-208ENST00000565070 WDR63Q8IWG1 891 aa16.46■□□□□ 0.22
NSMCE1-208ENST00000565070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.22
NSMCE1-208ENST00000565070 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
NSMCE1-208ENST00000565070 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
NSMCE1-208ENST00000565070 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
NSMCE1-208ENST00000565070 MEGF6O75095 1541 aa16.45■□□□□ 0.22
NSMCE1-208ENST00000565070 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
NSMCE1-208ENST00000565070 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
NSMCE1-208ENST00000565070 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
NSMCE1-208ENST00000565070 PHACTR3Q96KR7 559 aa16.44■□□□□ 0.22
NSMCE1-208ENST00000565070 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
NSMCE1-208ENST00000565070 CCDC136Q96JN2 1154 aa16.43■□□□□ 0.22
NSMCE1-208ENST00000565070 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
NSMCE1-208ENST00000565070 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 PLIN1O60240 522 aa16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 GLI3P10071 1580 aa16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
NSMCE1-208ENST00000565070 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
NSMCE1-208ENST00000565070 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
NSMCE1-208ENST00000565070 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
NSMCE1-208ENST00000565070 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
NSMCE1-208ENST00000565070 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
NSMCE1-208ENST00000565070 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.22
NSMCE1-208ENST00000565070 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.22
NSMCE1-208ENST00000565070 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
NSMCE1-208ENST00000565070 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
NSMCE1-208ENST00000565070 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.39■□□□□ 0.21
NSMCE1-208ENST00000565070 THSD7AQ9UPZ6 1657 aa16.39■□□□□ 0.21
NSMCE1-208ENST00000565070 EXOC5O00471 708 aa16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 RIPK4P57078 832 aa16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
NSMCE1-208ENST00000565070 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 DDB1Q16531 1140 aa16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
NSMCE1-208ENST00000565070 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
NSMCE1-208ENST00000565070 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
NSMCE1-208ENST00000565070 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
NSMCE1-208ENST00000565070 A0A0G2JS52 829 aa16.35■□□□□ 0.21
NSMCE1-208ENST00000565070 MYT1Q01538 1121 aa16.35■□□□□ 0.21
NSMCE1-208ENST00000565070 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
NSMCE1-208ENST00000565070 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
NSMCE1-208ENST00000565070 IL16Q14005 1332 aa16.35■□□□□ 0.21
NSMCE1-208ENST00000565070 PHKG2P15735 406 aa16.34■□□□□ 0.21
NSMCE1-208ENST00000565070 RXRBP28702 533 aa16.34■□□□□ 0.21
NSMCE1-208ENST00000565070 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
NSMCE1-208ENST00000565070 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
NSMCE1-208ENST00000565070 CYP27B1O15528 508 aa16.33■□□□□ 0.2
NSMCE1-208ENST00000565070 BCAR3O75815 825 aa16.33■□□□□ 0.2
NSMCE1-208ENST00000565070 RGS17Q9UGC6 210 aaPredicted RBP16.33■□□□□ 0.2
NSMCE1-208ENST00000565070 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
NSMCE1-208ENST00000565070 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
NSMCE1-208ENST00000565070 DCAF5Q96JK2 942 aa16.32■□□□□ 0.2
NSMCE1-208ENST00000565070 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
NSMCE1-208ENST00000565070 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-208ENST00000565070 NKX1-1Q15270 411 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-208ENST00000565070 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
NSMCE1-208ENST00000565070 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
NSMCE1-208ENST00000565070 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms