RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 MTHFSDQ2M296 383 aaKnown RBP27.91■■■□□ 2.06
SPSB3-206ENST00000564709 ARHGAP23Q9P227 1491 aa27.91■■■□□ 2.06
SPSB3-206ENST00000564709 TBC1D9Q6ZT07 1266 aa27.91■■■□□ 2.06
SPSB3-206ENST00000564709 KIF24Q5T7B8 1368 aa27.91■■■□□ 2.06
SPSB3-206ENST00000564709 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
SPSB3-206ENST00000564709 KIAA0232Q92628 1395 aa27.9■■■□□ 2.06
SPSB3-206ENST00000564709 CEP170BQ9Y4F5 1589 aaPredicted RBP27.89■■■□□ 2.06
SPSB3-206ENST00000564709 FLT4P35916 1363 aa27.89■■■□□ 2.06
SPSB3-206ENST00000564709 ATP10DQ9P241 1426 aa27.89■■■□□ 2.06
SPSB3-206ENST00000564709 FER1L4A9Z1Z3 1794 aa27.89■■■□□ 2.06
SPSB3-206ENST00000564709 SBNO1A3KN83 1393 aa27.89■■■□□ 2.05
SPSB3-206ENST00000564709 TBX22Q9Y458 520 aa27.89■■■□□ 2.05
SPSB3-206ENST00000564709 AMPHP49418 695 aa27.88■■■□□ 2.05
SPSB3-206ENST00000564709 HAP1P54257 671 aaPredicted RBP27.87■■■□□ 2.05
SPSB3-206ENST00000564709 NUTM2GQ5VZR2 741 aa27.87■■■□□ 2.05
SPSB3-206ENST00000564709 GSPT1P15170 499 aaKnown RBP27.86■■■□□ 2.05
SPSB3-206ENST00000564709 SLC4A2P04920 1241 aa27.86■■■□□ 2.05
SPSB3-206ENST00000564709 RTF1Q92541 710 aaKnown RBP27.86■■■□□ 2.05
SPSB3-206ENST00000564709 EYA1Q99502 592 aa27.86■■■□□ 2.05
SPSB3-206ENST00000564709 DCTPP1Q9H773 170 aa27.86■■■□□ 2.05
SPSB3-206ENST00000564709 TSPYL4Q9UJ04 414 aa27.86■■■□□ 2.05
SPSB3-206ENST00000564709 C16orf71Q8IYS4 520 aaPredicted RBP27.85■■■□□ 2.05
SPSB3-206ENST00000564709 MEIS3Q99687 375 aa27.85■■■□□ 2.05
SPSB3-206ENST00000564709 CHMP5Q9NZZ3 219 aa27.85■■■□□ 2.05
SPSB3-206ENST00000564709 PLEKHM2Q8IWE5 1019 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 APBB1O00213 710 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 CEP85Q6P2H3 762 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 KIF2CQ99661 725 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 PTPRCP08575 1304 aa27.84■■■□□ 2.05
SPSB3-206ENST00000564709 RTL1A6NKG5 1358 aa27.83■■■□□ 2.04
SPSB3-206ENST00000564709 NLRP6P59044 892 aa27.83■■■□□ 2.04
SPSB3-206ENST00000564709 G2E3Q7L622 706 aa27.83■■■□□ 2.04
SPSB3-206ENST00000564709 KDRP35968 1356 aa27.82■■■□□ 2.04
SPSB3-206ENST00000564709 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
SPSB3-206ENST00000564709 OTUD7AQ8TE49 926 aaPredicted RBP27.81■■■□□ 2.04
SPSB3-206ENST00000564709 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
SPSB3-206ENST00000564709 CDC45O75419 566 aa27.81■■■□□ 2.04
SPSB3-206ENST00000564709 F6X3S4 739 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 MCM4P33991 863 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 THEMISQ8N1K5 641 aaPredicted RBP27.8■■■□□ 2.04
SPSB3-206ENST00000564709 NCOA3Q9Y6Q9 1424 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 SMARCA5O60264 1052 aaPredicted RBP27.8■■■□□ 2.04
SPSB3-206ENST00000564709 KCNA6P17658 529 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 SLC4A10Q6U841 1118 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 SNX21Q969T3 373 aa27.8■■■□□ 2.04
SPSB3-206ENST00000564709 CD2BP2O95400 341 aaKnown RBP27.79■■■□□ 2.04
SPSB3-206ENST00000564709 RBM42Q9BTD8 480 aaKnown RBP27.79■■■□□ 2.04
SPSB3-206ENST00000564709 HSP90AB1P08238 724 aaKnown RBP27.78■■■□□ 2.04
SPSB3-206ENST00000564709 MARF1Q9Y4F3 1742 aaKnown RBP27.78■■■□□ 2.04
SPSB3-206ENST00000564709 RPAP2Q8IXW5 612 aaPredicted RBP27.78■■■□□ 2.04
SPSB3-206ENST00000564709 TTC22Q5TAA0 569 aa27.77■■■□□ 2.04
SPSB3-206ENST00000564709 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
SPSB3-206ENST00000564709 LTV1Q96GA3 475 aaPredicted RBP27.76■■■□□ 2.03
SPSB3-206ENST00000564709 FOXD4L1Q9NU39 408 aa27.75■■■□□ 2.03
SPSB3-206ENST00000564709 HOXC9P31274 260 aa27.74■■■□□ 2.03
SPSB3-206ENST00000564709 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
SPSB3-206ENST00000564709 DDIT3P35638 169 aa27.73■■■□□ 2.03
SPSB3-206ENST00000564709 NECTIN2Q92692 538 aa27.73■■■□□ 2.03
SPSB3-206ENST00000564709 LRRC37A3O60309 1634 aa27.72■■■□□ 2.03
SPSB3-206ENST00000564709 C14orf37Q86TY3 774 aa27.72■■■□□ 2.03
SPSB3-206ENST00000564709 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
SPSB3-206ENST00000564709 ARXQ96QS3 562 aa27.72■■■□□ 2.03
SPSB3-206ENST00000564709 GZF1Q9H116 711 aaPredicted RBP27.72■■■□□ 2.03
SPSB3-206ENST00000564709 ANKARQ7Z5J8 1434 aa27.71■■■□□ 2.03
SPSB3-206ENST00000564709 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
SPSB3-206ENST00000564709 NWD1Q149M9 1564 aa27.7■■■□□ 2.03
SPSB3-206ENST00000564709 FAM208AQ9UK61 1670 aaKnown RBP27.7■■■□□ 2.02
SPSB3-206ENST00000564709 GNAT3A8MTJ3 354 aa27.69■■■□□ 2.02
SPSB3-206ENST00000564709 USHBP1Q8N6Y0 703 aa27.69■■■□□ 2.02
SPSB3-206ENST00000564709 HSP90AA1P07900 732 aaKnown RBP27.68■■■□□ 2.02
SPSB3-206ENST00000564709 RBM33Q96EV2 1170 aaKnown RBP27.68■■■□□ 2.02
SPSB3-206ENST00000564709 STK31Q9BXU1 1019 aa27.68■■■□□ 2.02
SPSB3-206ENST00000564709 SDSP20132 328 aa27.67■■■□□ 2.02
SPSB3-206ENST00000564709 CCT4P50991 539 aaKnown RBP27.67■■■□□ 2.02
SPSB3-206ENST00000564709 K7ELQ4 463 aaPredicted RBP27.67■■■□□ 2.02
SPSB3-206ENST00000564709 TRAK2O60296 914 aa27.66■■■□□ 2.02
SPSB3-206ENST00000564709 TNPO1Q92973 898 aaKnown RBP27.65■■■□□ 2.02
SPSB3-206ENST00000564709 FLIIQ13045 1269 aa27.64■■■□□ 2.02
SPSB3-206ENST00000564709 FKBP5Q13451 457 aaPredicted RBP27.64■■■□□ 2.02
SPSB3-206ENST00000564709 IL17REQ8NFR9 667 aa27.64■■■□□ 2.02
SPSB3-206ENST00000564709 MAP3K5Q99683 1374 aa27.64■■■□□ 2.02
SPSB3-206ENST00000564709 HMMRO75330 724 aa27.64■■■□□ 2.02
SPSB3-206ENST00000564709 LTN1O94822 1766 aa27.64■■■□□ 2.01
SPSB3-206ENST00000564709 SETD1BQ9UPS6 1966 aaKnown RBP27.63■■■□□ 2.01
SPSB3-206ENST00000564709 HTATSF1O43719 755 aaKnown RBP27.63■■■□□ 2.01
SPSB3-206ENST00000564709 USP54Q70EL1 1684 aa27.63■■■□□ 2.01
SPSB3-206ENST00000564709 EXOC6BQ9Y2D4 811 aa27.62■■■□□ 2.01
SPSB3-206ENST00000564709 CCDC30Q5VVM6 783 aa27.62■■■□□ 2.01
SPSB3-206ENST00000564709 GNAI2P04899 355 aa27.61■■■□□ 2.01
SPSB3-206ENST00000564709 USP26Q9BXU7 913 aa27.61■■■□□ 2.01
SPSB3-206ENST00000564709 DDX11L8A8MPP1 907 aa27.6■■■□□ 2.01
SPSB3-206ENST00000564709 CIZ1Q9ULV3 898 aaPredicted RBP27.6■■■□□ 2.01
SPSB3-206ENST00000564709 RAB3GAP1Q15042 981 aa27.59■■■□□ 2.01
SPSB3-206ENST00000564709 PHF8Q9UPP1 1060 aa27.59■■■□□ 2.01
SPSB3-206ENST00000564709 ZBTB7CA1YPR0 619 aa27.58■■■□□ 2.01
SPSB3-206ENST00000564709 TSHZ3Q63HK5 1081 aa27.58■■■□□ 2.01
SPSB3-206ENST00000564709 L1TD1Q5T7N2 865 aaKnown RBP27.58■■■□□ 2.01
SPSB3-206ENST00000564709 TAF7Q15545 349 aaPredicted RBP27.57■■■□□ 2
SPSB3-206ENST00000564709 CASC1Q6TDU7 716 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms