RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 KIAA0232Q92628 1395 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 TECPR2O15040 1411 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 NUCB2P80303 420 aa9.46□□□□□ -0.9
ATXN3-249ENST00000564606 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
ATXN3-249ENST00000564606 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
ATXN3-249ENST00000564606 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
ATXN3-249ENST00000564606 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.9
ATXN3-249ENST00000564606 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
ATXN3-249ENST00000564606 ZBTB7BO15156 539 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-249ENST00000564606 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
ATXN3-249ENST00000564606 VAMP4O75379 141 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 REC8O95072 547 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 RABEP1Q15276 862 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-249ENST00000564606 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
ATXN3-249ENST00000564606 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
ATXN3-249ENST00000564606 ABCC4O15439 1325 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
ATXN3-249ENST00000564606 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
ATXN3-249ENST00000564606 ST18O60284 1047 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 MCCP23508 829 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 IL13P35225 146 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 MCM2P49736 904 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
ATXN3-249ENST00000564606 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
ATXN3-249ENST00000564606 NUDT16Q96DE0 195 aaKnown RBP9.44□□□□□ -0.9
ATXN3-249ENST00000564606 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 HDAC5Q9UQL6 1122 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 LRRC7Q96NW7 1537 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 KNDC1Q76NI1 1749 aa9.44□□□□□ -0.9
ATXN3-249ENST00000564606 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
ATXN3-249ENST00000564606 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-249ENST00000564606 TRAK2O60296 914 aa9.42□□□□□ -0.9
ATXN3-249ENST00000564606 SEC24BO95487 1268 aa9.42□□□□□ -0.9
ATXN3-249ENST00000564606 CCT4P50991 539 aaKnown RBP9.42□□□□□ -0.9
ATXN3-249ENST00000564606 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
ATXN3-249ENST00000564606 CPS1P31327 1500 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 MAP3K13O43283 966 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-249ENST00000564606 STK31Q9BXU1 1019 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
ATXN3-249ENST00000564606 RTL1A6NKG5 1358 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 TNRQ92752 1358 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 GNAI3P08754 354 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 IFNL1Q8IU54 200 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 KIF12Q96FN5 646 aa9.4□□□□□ -0.9
ATXN3-249ENST00000564606 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
ATXN3-249ENST00000564606 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
ATXN3-249ENST00000564606 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
ATXN3-249ENST00000564606 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-249ENST00000564606 CLEC17AQ6ZS10 378 aa9.39□□□□□ -0.91
ATXN3-249ENST00000564606 IBTKQ9P2D0 1353 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-249ENST00000564606 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 CHL1O00533 1208 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 HMOX1P09601 288 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 ITSN1Q15811 1721 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
ATXN3-249ENST00000564606 TMEM2Q9UHN6 1383 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 FSD2A1L4K1 749 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 TTC22Q5TAA0 569 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 CCDC30Q5VVM6 783 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
ATXN3-249ENST00000564606 PSEN1P49768 467 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 ANAPC15P60006 121 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-249ENST00000564606 NME9Q86XW9 330 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
ATXN3-249ENST00000564606 SYAP1Q96A49 352 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-249ENST00000564606 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 NRKQ7Z2Y5 1582 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 SBNO1A3KN83 1393 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 FLT4P35916 1363 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 USP31Q70CQ4 1352 aa9.36□□□□□ -0.91
ATXN3-249ENST00000564606 MAP2P11137 1827 aaKnown RBP9.35□□□□□ -0.91
ATXN3-249ENST00000564606 AOX1Q06278 1338 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 ERC2O15083 957 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 GNAI2P04899 355 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 465.7 ms