RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
TCF4-224ENST00000564403 CDC42BPGQ6DT37 1551 aa11.49□□□□□ -0.57
TCF4-224ENST00000564403 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
TCF4-224ENST00000564403 EIF4A2Q14240 407 aaKnown RBP11.48□□□□□ -0.57
TCF4-224ENST00000564403 PDE3AQ14432 1141 aa11.48□□□□□ -0.57
TCF4-224ENST00000564403 SULT6B1Q6IMI4 303 aa11.48□□□□□ -0.57
TCF4-224ENST00000564403 PDCL3Q9H2J4 239 aa11.48□□□□□ -0.57
TCF4-224ENST00000564403 SMC4Q9NTJ3 1288 aa11.48□□□□□ -0.57
TCF4-224ENST00000564403 SLIT1O75093 1534 aa11.47□□□□□ -0.57
TCF4-224ENST00000564403 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
TCF4-224ENST00000564403 ADGRB2O60241 1585 aa11.47□□□□□ -0.57
TCF4-224ENST00000564403 TSPYL6Q8N831 410 aa11.47□□□□□ -0.57
TCF4-224ENST00000564403 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
TCF4-224ENST00000564403 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.57
TCF4-224ENST00000564403 USP6P35125 1406 aa11.46□□□□□ -0.57
TCF4-224ENST00000564403 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
TCF4-224ENST00000564403 CENPQQ7L2Z9 268 aaPredicted RBP11.46□□□□□ -0.57
TCF4-224ENST00000564403 NFE2L2Q16236 605 aa11.46□□□□□ -0.58
TCF4-224ENST00000564403 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.58
TCF4-224ENST00000564403 ANKLE2Q86XL3 938 aa11.45□□□□□ -0.58
TCF4-224ENST00000564403 NOB1Q9ULX3 412 aaKnown RBP11.45□□□□□ -0.58
TCF4-224ENST00000564403 AATKQ6ZMQ8 1374 aa11.45□□□□□ -0.58
TCF4-224ENST00000564403 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
TCF4-224ENST00000564403 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
TCF4-224ENST00000564403 TRIM27P14373 513 aa11.44□□□□□ -0.58
TCF4-224ENST00000564403 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
TCF4-224ENST00000564403 NLRP6P59044 892 aa11.44□□□□□ -0.58
TCF4-224ENST00000564403 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
TCF4-224ENST00000564403 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
TCF4-224ENST00000564403 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
TCF4-224ENST00000564403 RAD21O60216 631 aa11.44□□□□□ -0.58
TCF4-224ENST00000564403 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
TCF4-224ENST00000564403 FOXO3O43524 673 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
TCF4-224ENST00000564403 ZKSCAN2Q63HK3 967 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
TCF4-224ENST00000564403 XPCQ01831 940 aaPredicted RBP11.43□□□□□ -0.58
TCF4-224ENST00000564403 MCM10Q7L590 875 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 EGFL6Q8IUX8 553 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
TCF4-224ENST00000564403 CDK12Q9NYV4 1490 aaPredicted RBP11.42□□□□□ -0.58
TCF4-224ENST00000564403 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
TCF4-224ENST00000564403 LTV1Q96GA3 475 aaPredicted RBP11.42□□□□□ -0.58
TCF4-224ENST00000564403 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 ZHX1Q9UKY1 873 aaPredicted RBP11.42□□□□□ -0.58
TCF4-224ENST00000564403 MTMR7Q9Y216 660 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 OVOS2A0A0J9YW53 1432 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 OVOS2Q6IE36 1432 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 SSH2Q76I76 1423 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 ABTB2Q8N961 1025 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
TCF4-224ENST00000564403 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
TCF4-224ENST00000564403 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 IL16Q14005 1332 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 MVPQ14764 893 aaKnown RBP11.41□□□□□ -0.58
TCF4-224ENST00000564403 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
TCF4-224ENST00000564403 PTCH1Q13635 1447 aa11.4□□□□□ -0.58
TCF4-224ENST00000564403 VAMP4O75379 141 aa11.4□□□□□ -0.58
TCF4-224ENST00000564403 AMPHP49418 695 aa11.4□□□□□ -0.58
TCF4-224ENST00000564403 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
TCF4-224ENST00000564403 TMEM57Q8N5G2 664 aa11.4□□□□□ -0.58
TCF4-224ENST00000564403 MS4A1P11836 297 aa11.4□□□□□ -0.59
TCF4-224ENST00000564403 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.59
TCF4-224ENST00000564403 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.59
TCF4-224ENST00000564403 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.59
TCF4-224ENST00000564403 MPNDQ8N594 471 aa11.4□□□□□ -0.59
TCF4-224ENST00000564403 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
TCF4-224ENST00000564403 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
TCF4-224ENST00000564403 ANP32AP39687 249 aaKnown RBP11.39□□□□□ -0.59
TCF4-224ENST00000564403 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
TCF4-224ENST00000564403 ORAI2Q96SN7 254 aa11.39□□□□□ -0.59
TCF4-224ENST00000564403 EYA1Q99502 592 aa11.39□□□□□ -0.59
TCF4-224ENST00000564403 ZBTB22O15209 634 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 ZNF853P0CG23 659 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 SGSM3Q96HU1 749 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
TCF4-224ENST00000564403 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 GNAI1P63096 354 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
TCF4-224ENST00000564403 TWISTNBQ3B726 338 aaPredicted RBP11.37□□□□□ -0.59
TCF4-224ENST00000564403 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 IRF6O14896 467 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 HSP90AB4PQ58FF6 505 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 IPO9Q96P70 1041 aaKnown RBP11.37□□□□□ -0.59
TCF4-224ENST00000564403 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
TCF4-224ENST00000564403 CT47B1P0C2W7 299 aaPredicted RBP11.36□□□□□ -0.59
TCF4-224ENST00000564403 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
TCF4-224ENST00000564403 NBPF11Q86T75 865 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms