RNA–Protein interactions for RNA: ENST00000564386.6

GCSH-203, Transcript of glycine cleavage system protein H, humanhuman

TSL 2

Gene GCSH, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-203ENST00000564386 IGSF1Q8N6C5 1336 aa29.18■■■□□ 2.26
GCSH-203ENST00000564386 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
GCSH-203ENST00000564386 DEFB132Q7Z7B7 95 aa29.16■■■□□ 2.26
GCSH-203ENST00000564386 DDX54Q8TDD1 881 aaKnown RBP29.16■■■□□ 2.26
GCSH-203ENST00000564386 DOT1LQ8TEK3 1739 aa29.14■■■□□ 2.25
GCSH-203ENST00000564386 RGPD3A6NKT7 1758 aaPredicted RBP29.13■■■□□ 2.25
GCSH-203ENST00000564386 RGPD4Q7Z3J3 1758 aa29.13■■■□□ 2.25
GCSH-203ENST00000564386 PLEKHG2Q9H7P9 1386 aa29.13■■■□□ 2.25
GCSH-203ENST00000564386 APBA3O96018 575 aa29.12■■■□□ 2.25
GCSH-203ENST00000564386 IL13P35225 146 aa29.12■■■□□ 2.25
GCSH-203ENST00000564386 PCDH11XQ9BZA7 1347 aa29.12■■■□□ 2.25
GCSH-203ENST00000564386 PCDH11YQ9BZA8 1340 aa29.12■■■□□ 2.25
GCSH-203ENST00000564386 BCL11BQ9C0K0 894 aaPredicted RBP29.11■■■□□ 2.25
GCSH-203ENST00000564386 COL3A1P02461 1466 aaPredicted RBP29.1■■■□□ 2.25
GCSH-203ENST00000564386 BTAF1O14981 1849 aa29.09■■■□□ 2.25
GCSH-203ENST00000564386 DIAPH1O60610 1272 aaKnown RBP29.09■■■□□ 2.25
GCSH-203ENST00000564386 EN1Q05925 392 aaPredicted RBP29.09■■■□□ 2.25
GCSH-203ENST00000564386 SPG7Q9UQ90 795 aa29.09■■■□□ 2.25
GCSH-203ENST00000564386 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
GCSH-203ENST00000564386 RREB1Q92766 1687 aa29.09■■■□□ 2.25
GCSH-203ENST00000564386 PPP2R1AP30153 589 aa29.08■■■□□ 2.25
GCSH-203ENST00000564386 ACSBG1Q96GR2 724 aa29.07■■■□□ 2.24
GCSH-203ENST00000564386 CFAP53Q96M91 514 aa29.07■■■□□ 2.24
GCSH-203ENST00000564386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.07■■■□□ 2.24
GCSH-203ENST00000564386 KDRP35968 1356 aa29.06■■■□□ 2.24
GCSH-203ENST00000564386 SULT6B1Q6IMI4 303 aa29.04■■■□□ 2.24
GCSH-203ENST00000564386 AEBP1Q8IUX7 1158 aa29.03■■■□□ 2.24
GCSH-203ENST00000564386 CAMKK2Q96RR4 588 aa29.03■■■□□ 2.24
GCSH-203ENST00000564386 ZNF316A6NFI3 1004 aaPredicted RBP29.02■■■□□ 2.24
GCSH-203ENST00000564386 CYP27B1O15528 508 aa29.02■■■□□ 2.24
GCSH-203ENST00000564386 KCNQ2O43526 872 aa29.02■■■□□ 2.24
GCSH-203ENST00000564386 EZH2Q15910 746 aaKnown RBP29.02■■■□□ 2.24
GCSH-203ENST00000564386 PTF1AQ7RTS3 328 aa29.02■■■□□ 2.24
GCSH-203ENST00000564386 NUP188Q5SRE5 1749 aa29.02■■■□□ 2.24
GCSH-203ENST00000564386 TOGARAM1Q9Y4F4 1720 aa29.01■■■□□ 2.23
GCSH-203ENST00000564386 ITGB4P16144 1822 aa29.01■■■□□ 2.23
GCSH-203ENST00000564386 PLSCR1O15162 318 aa29■■■□□ 2.23
GCSH-203ENST00000564386 RALBP1Q15311 655 aa28.99■■■□□ 2.23
GCSH-203ENST00000564386 PLEKHO1Q53GL0 409 aaPredicted RBP28.99■■■□□ 2.23
GCSH-203ENST00000564386 AMOTQ4VCS5 1084 aa28.98■■■□□ 2.23
GCSH-203ENST00000564386 U2SURPO15042 1029 aaKnown RBP28.97■■■□□ 2.23
GCSH-203ENST00000564386 IFNL2Q8IZJ0 200 aa28.97■■■□□ 2.23
GCSH-203ENST00000564386 HMOX1P09601 288 aa28.96■■■□□ 2.23
GCSH-203ENST00000564386 SYTL4Q96C24 671 aaPredicted RBP28.96■■■□□ 2.23
GCSH-203ENST00000564386 PRIM1P49642 420 aaKnown RBP28.95■■■□□ 2.22
GCSH-203ENST00000564386 NUDCQ9Y266 331 aa28.95■■■□□ 2.22
GCSH-203ENST00000564386 PHKG2P15735 406 aa28.94■■■□□ 2.22
GCSH-203ENST00000564386 NKX1-1Q15270 411 aaPredicted RBP28.94■■■□□ 2.22
GCSH-203ENST00000564386 ZNF530Q6P9A1 599 aaPredicted RBP28.93■■■□□ 2.22
GCSH-203ENST00000564386 VIRMAQ69YN4 1812 aaKnown RBP28.92■■■□□ 2.22
GCSH-203ENST00000564386 LY75O60449 1722 aa28.9■■■□□ 2.22
GCSH-203ENST00000564386 HSP90AB1P08238 724 aaKnown RBP28.9■■■□□ 2.22
GCSH-203ENST00000564386 C1orf141Q5JVX7 400 aa28.89■■■□□ 2.22
GCSH-203ENST00000564386 MYBBP1AQ9BQG0 1328 aaKnown RBP28.88■■■□□ 2.21
GCSH-203ENST00000564386 SCN11AQ9UI33 1791 aa28.88■■■□□ 2.21
GCSH-203ENST00000564386 TXNRD1Q16881 649 aa28.86■■■□□ 2.21
GCSH-203ENST00000564386 DCAF5Q96JK2 942 aa28.85■■■□□ 2.21
GCSH-203ENST00000564386 U2AF1L5P0DN76 240 aaPredicted RBP28.84■■■□□ 2.21
GCSH-203ENST00000564386 U2AF1Q01081 240 aaKnown RBP eCLIP28.84■■■□□ 2.21
GCSH-203ENST00000564386 NBPF14Q5TI25 921 aa28.84■■■□□ 2.21
GCSH-203ENST00000564386 MPRIPQ6WCQ1 1025 aa28.84■■■□□ 2.21
GCSH-203ENST00000564386 PROM2Q8N271 834 aa28.83■■■□□ 2.21
GCSH-203ENST00000564386 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
GCSH-203ENST00000564386 KDM6AO15550 1401 aaPredicted RBP28.82■■■□□ 2.2
GCSH-203ENST00000564386 AKAP4Q5JQC9 854 aa28.81■■■□□ 2.2
GCSH-203ENST00000564386 RSPH6AQ9H0K4 717 aa28.81■■■□□ 2.2
GCSH-203ENST00000564386 TMOD3Q9NYL9 352 aa28.81■■■□□ 2.2
GCSH-203ENST00000564386 ERVV-2B6SEH9 535 aa28.79■■■□□ 2.2
GCSH-203ENST00000564386 PRKAR2BP31323 418 aa28.79■■■□□ 2.2
GCSH-203ENST00000564386 MTHFSDQ2M296 383 aaKnown RBP28.79■■■□□ 2.2
GCSH-203ENST00000564386 PAPPAQ13219 1627 aa28.79■■■□□ 2.2
GCSH-203ENST00000564386 FCHSD2O94868 740 aa28.78■■■□□ 2.2
GCSH-203ENST00000564386 SLC27A3Q5K4L6 730 aa28.78■■■□□ 2.2
GCSH-203ENST00000564386 PIGBQ92521 554 aa28.78■■■□□ 2.2
GCSH-203ENST00000564386 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
GCSH-203ENST00000564386 PSDA5PKW4 1024 aaPredicted RBP28.77■■■□□ 2.2
GCSH-203ENST00000564386 R3HDM1Q15032 1099 aaKnown RBP28.77■■■□□ 2.2
GCSH-203ENST00000564386 GAS2L2Q8NHY3 880 aa28.77■■■□□ 2.2
GCSH-203ENST00000564386 SMARCC1Q92922 1105 aaPredicted RBP28.77■■■□□ 2.2
GCSH-203ENST00000564386 PALLDQ8WX93 1383 aa28.75■■■□□ 2.19
GCSH-203ENST00000564386 TAF1LQ8IZX4 1826 aa28.75■■■□□ 2.19
GCSH-203ENST00000564386 C5P01031 1676 aa28.74■■■□□ 2.19
GCSH-203ENST00000564386 CABP4P57796 275 aa28.74■■■□□ 2.19
GCSH-203ENST00000564386 ANO8Q9HCE9 1232 aaPredicted RBP28.73■■■□□ 2.19
GCSH-203ENST00000564386 MAP3K5Q99683 1374 aa28.73■■■□□ 2.19
GCSH-203ENST00000564386 LRRC4BQ9NT99 713 aa28.72■■■□□ 2.19
GCSH-203ENST00000564386 STK32BQ9NY57 414 aa28.72■■■□□ 2.19
GCSH-203ENST00000564386 CCNL1Q9UK58 526 aaPredicted RBP28.72■■■□□ 2.19
GCSH-203ENST00000564386 MRC1P22897 1456 aa28.72■■■□□ 2.19
GCSH-203ENST00000564386 PHACTR3Q96KR7 559 aa28.71■■■□□ 2.19
GCSH-203ENST00000564386 NEFMP07197 916 aa28.7■■■□□ 2.18
GCSH-203ENST00000564386 QSER1Q2KHR3 1735 aa28.69■■■□□ 2.18
GCSH-203ENST00000564386 DLG5Q8TDM6 1919 aa28.69■■■□□ 2.18
GCSH-203ENST00000564386 RNMTO43148 476 aaKnown RBP28.69■■■□□ 2.18
GCSH-203ENST00000564386 PNNQ9H307 717 aaKnown RBP28.69■■■□□ 2.18
GCSH-203ENST00000564386 GNAT3A8MTJ3 354 aa28.68■■■□□ 2.18
GCSH-203ENST00000564386 HMGB2P26583 209 aaKnown RBP28.68■■■□□ 2.18
GCSH-203ENST00000564386 ASAP1Q9ULH1 1129 aa28.68■■■□□ 2.18
GCSH-203ENST00000564386 TUBGCP6Q96RT7 1819 aa28.67■■■□□ 2.18
GCSH-203ENST00000564386 LGR6Q9HBX8 967 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms