RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 WWC3Q9ULE0 1092 aa26.13■■□□□ 1.77
E4F1-203ENST00000563643 TOMM70O94826 608 aa26.12■■□□□ 1.77
E4F1-203ENST00000563643 IGSF1Q8N6C5 1336 aa26.12■■□□□ 1.77
E4F1-203ENST00000563643 PCNTO95613 3336 aa26.11■■□□□ 1.77
E4F1-203ENST00000563643 PRELPP51888 382 aa26.1■■□□□ 1.77
E4F1-203ENST00000563643 DOT1LQ8TEK3 1739 aa26.1■■□□□ 1.77
E4F1-203ENST00000563643 EVC2Q86UK5 1308 aa26.1■■□□□ 1.77
E4F1-203ENST00000563643 TNS4Q8IZW8 715 aa26.09■■□□□ 1.77
E4F1-203ENST00000563643 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
E4F1-203ENST00000563643 WDR90Q96KV7 1748 aa26.06■■□□□ 1.76
E4F1-203ENST00000563643 USP31Q70CQ4 1352 aa26.06■■□□□ 1.76
E4F1-203ENST00000563643 LTN1O94822 1766 aa26.05■■□□□ 1.76
E4F1-203ENST00000563643 JMYQ8N9B5 988 aa26.05■■□□□ 1.76
E4F1-203ENST00000563643 KLRG1Q96E93 195 aa26.05■■□□□ 1.76
E4F1-203ENST00000563643 USP47Q96K76 1375 aa26.05■■□□□ 1.76
E4F1-203ENST00000563643 CICQ96RK0 1608 aaPredicted RBP26.04■■□□□ 1.76
E4F1-203ENST00000563643 FLAD1Q8NFF5 587 aa26.03■■□□□ 1.76
E4F1-203ENST00000563643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.02■■□□□ 1.76
E4F1-203ENST00000563643 USP54Q70EL1 1684 aa26.02■■□□□ 1.76
E4F1-203ENST00000563643 C5P01031 1676 aa26.01■■□□□ 1.75
E4F1-203ENST00000563643 HTRA3P83110 453 aa26.01■■□□□ 1.75
E4F1-203ENST00000563643 MON2Q7Z3U7 1717 aa25.98■■□□□ 1.75
E4F1-203ENST00000563643 NME9Q86XW9 330 aa25.98■■□□□ 1.75
E4F1-203ENST00000563643 NMRK2Q9NPI5 230 aa25.98■■□□□ 1.75
E4F1-203ENST00000563643 RBM46Q8TBY0 533 aaKnown RBP25.96■■□□□ 1.75
E4F1-203ENST00000563643 FAM208AQ9UK61 1670 aaKnown RBP25.95■■□□□ 1.74
E4F1-203ENST00000563643 ZCRB1Q8TBF4 217 aaKnown RBP25.94■■□□□ 1.74
E4F1-203ENST00000563643 LTV1Q96GA3 475 aaPredicted RBP25.94■■□□□ 1.74
E4F1-203ENST00000563643 HMGB2P26583 209 aaKnown RBP25.92■■□□□ 1.74
E4F1-203ENST00000563643 IP6K1Q92551 441 aa25.92■■□□□ 1.74
E4F1-203ENST00000563643 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
E4F1-203ENST00000563643 AMIGO3Q86WK7 504 aa25.91■■□□□ 1.74
E4F1-203ENST00000563643 MEGF6O75095 1541 aa25.91■■□□□ 1.74
E4F1-203ENST00000563643 PALLDQ8WX93 1383 aa25.9■■□□□ 1.74
E4F1-203ENST00000563643 TOGARAM1Q9Y4F4 1720 aa25.89■■□□□ 1.74
E4F1-203ENST00000563643 FSTL1Q12841 308 aa25.89■■□□□ 1.74
E4F1-203ENST00000563643 C16orf71Q8IYS4 520 aaPredicted RBP25.89■■□□□ 1.74
E4F1-203ENST00000563643 AK7Q96M32 723 aa25.89■■□□□ 1.74
E4F1-203ENST00000563643 PHF14O94880 888 aa25.88■■□□□ 1.73
E4F1-203ENST00000563643 TAF1LQ8IZX4 1826 aa25.88■■□□□ 1.73
E4F1-203ENST00000563643 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
E4F1-203ENST00000563643 PXDNLA1KZ92 1463 aa25.86■■□□□ 1.73
E4F1-203ENST00000563643 CD163L1Q9NR16 1453 aa25.86■■□□□ 1.73
E4F1-203ENST00000563643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.86■■□□□ 1.73
E4F1-203ENST00000563643 SMIM5Q71RC9 77 aa25.86■■□□□ 1.73
E4F1-203ENST00000563643 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
E4F1-203ENST00000563643 SLC34A2O95436 690 aa25.84■■□□□ 1.73
E4F1-203ENST00000563643 BCS1LQ9Y276 419 aa25.84■■□□□ 1.73
E4F1-203ENST00000563643 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
E4F1-203ENST00000563643 ARHGAP27Q6ZUM4 889 aa25.82■■□□□ 1.72
E4F1-203ENST00000563643 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
E4F1-203ENST00000563643 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
E4F1-203ENST00000563643 SSFA2P28290 1259 aa25.8■■□□□ 1.72
E4F1-203ENST00000563643 PLEKHG2Q9H7P9 1386 aa25.8■■□□□ 1.72
E4F1-203ENST00000563643 HSPA1AP0DMV8 641 aaKnown RBP25.79■■□□□ 1.72
E4F1-203ENST00000563643 HSPA1BP0DMV9 641 aaKnown RBP25.79■■□□□ 1.72
E4F1-203ENST00000563643 MPRIPQ6WCQ1 1025 aa25.79■■□□□ 1.72
E4F1-203ENST00000563643 KIAA1551Q9HCM1 1747 aa25.79■■□□□ 1.72
E4F1-203ENST00000563643 HOXC9P31274 260 aa25.78■■□□□ 1.72
E4F1-203ENST00000563643 TGFB2P61812 414 aa25.77■■□□□ 1.72
E4F1-203ENST00000563643 HDGFL2Q7Z4V5 671 aaPredicted RBP25.77■■□□□ 1.72
E4F1-203ENST00000563643 CGNL1Q0VF96 1302 aa25.77■■□□□ 1.72
E4F1-203ENST00000563643 MAP3K19Q56UN5 1328 aa25.77■■□□□ 1.72
E4F1-203ENST00000563643 A0A0G2JLW4 131 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 MMP10P09238 476 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 C9orf131Q5VYM1 1079 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 KCPQ6ZWJ8 1503 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 RGPD2P0DJD1 1756 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
E4F1-203ENST00000563643 SMARCC1Q92922 1105 aaPredicted RBP25.75■■□□□ 1.71
E4F1-203ENST00000563643 N4BP2Q86UW6 1770 aaPredicted RBP25.74■■□□□ 1.71
E4F1-203ENST00000563643 C10orf71Q711Q0 1435 aa25.74■■□□□ 1.71
E4F1-203ENST00000563643 KDM2BQ8NHM5 1336 aa25.74■■□□□ 1.71
E4F1-203ENST00000563643 TMC1Q8TDI8 760 aa25.74■■□□□ 1.71
E4F1-203ENST00000563643 PCDH11XQ9BZA7 1347 aa25.73■■□□□ 1.71
E4F1-203ENST00000563643 PCDH11YQ9BZA8 1340 aa25.73■■□□□ 1.71
E4F1-203ENST00000563643 RAPGEF4Q8WZA2 1011 aa25.73■■□□□ 1.71
E4F1-203ENST00000563643 ROCK2O75116 1388 aaKnown RBP25.72■■□□□ 1.71
E4F1-203ENST00000563643 FCHSD2O94868 740 aa25.72■■□□□ 1.71
E4F1-203ENST00000563643 AMPHP49418 695 aa25.72■■□□□ 1.71
E4F1-203ENST00000563643 NBPF6Q5VWK0 638 aa25.72■■□□□ 1.71
E4F1-203ENST00000563643 USHBP1Q8N6Y0 703 aa25.72■■□□□ 1.71
E4F1-203ENST00000563643 NBPF4Q96M43 638 aa25.72■■□□□ 1.71
E4F1-203ENST00000563643 A0A1W2PP64 1363 aa25.71■■□□□ 1.71
E4F1-203ENST00000563643 LINC00116Q8NCU8 138 aa25.71■■□□□ 1.71
E4F1-203ENST00000563643 SMC1BQ8NDV3 1235 aa25.71■■□□□ 1.71
E4F1-203ENST00000563643 SLC12A5Q9H2X9 1139 aa25.7■■□□□ 1.7
E4F1-203ENST00000563643 RRAGCQ9HB90 399 aa25.7■■□□□ 1.7
E4F1-203ENST00000563643 PKD1L3Q7Z443 1732 aa25.69■■□□□ 1.7
E4F1-203ENST00000563643 GNPATO15228 680 aa25.69■■□□□ 1.7
E4F1-203ENST00000563643 DPEP1P16444 411 aa25.69■■□□□ 1.7
E4F1-203ENST00000563643 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
E4F1-203ENST00000563643 FBLN1P23142 703 aa25.67■■□□□ 1.7
E4F1-203ENST00000563643 TERF2IPQ9NYB0 399 aa25.67■■□□□ 1.7
E4F1-203ENST00000563643 TNRC6CQ9HCJ0 1690 aaKnown RBP25.67■■□□□ 1.7
E4F1-203ENST00000563643 LOC102724428A0A0B4J2F2 783 aa25.66■■□□□ 1.7
E4F1-203ENST00000563643 SIK1P57059 783 aa25.66■■□□□ 1.7
E4F1-203ENST00000563643 RTL1A6NKG5 1358 aa25.66■■□□□ 1.7
E4F1-203ENST00000563643 CYP27B1O15528 508 aa25.65■■□□□ 1.7
E4F1-203ENST00000563643 PIGBQ92521 554 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms