RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
AC040174.1-201ENST00000563003 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
AC040174.1-201ENST00000563003 SMAP1Q8IYB5 467 aaPredicted RBP16.92■□□□□ 0.3
AC040174.1-201ENST00000563003 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
AC040174.1-201ENST00000563003 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
AC040174.1-201ENST00000563003 ARID3AQ99856 593 aa16.92■□□□□ 0.3
AC040174.1-201ENST00000563003 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
AC040174.1-201ENST00000563003 DIAPH1O60610 1272 aaKnown RBP16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 NUCB1Q02818 461 aa16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 NME9Q86XW9 330 aa16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 PDLIM2Q96JY6 352 aa16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 RBSNQ9H1K0 784 aa16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
AC040174.1-201ENST00000563003 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 COG3Q96JB2 828 aa16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
AC040174.1-201ENST00000563003 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.3
AC040174.1-201ENST00000563003 ACEP12821 1306 aa16.89■□□□□ 0.29
AC040174.1-201ENST00000563003 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
AC040174.1-201ENST00000563003 ATF7IPQ6VMQ6 1270 aa16.89■□□□□ 0.29
AC040174.1-201ENST00000563003 BMP2KLQ5H9B9 411 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 ZKSCAN5Q9Y2L8 839 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
AC040174.1-201ENST00000563003 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 KCNA6P17658 529 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 TMEM57Q8N5G2 664 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 CHD2O14647 1828 aaKnown RBP16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
AC040174.1-201ENST00000563003 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 LMBRD1Q9NUN5 540 aa16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 USP6P35125 1406 aa16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 STRCQ7RTU9 1775 aa16.86■□□□□ 0.29
AC040174.1-201ENST00000563003 FBLN1P23142 703 aa16.85■□□□□ 0.29
AC040174.1-201ENST00000563003 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
AC040174.1-201ENST00000563003 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
AC040174.1-201ENST00000563003 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 FCHSD2O94868 740 aa16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 ZHX1Q9UKY1 873 aaPredicted RBP16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 MCM5P33992 734 aa16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
AC040174.1-201ENST00000563003 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.28
AC040174.1-201ENST00000563003 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
AC040174.1-201ENST00000563003 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
AC040174.1-201ENST00000563003 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
AC040174.1-201ENST00000563003 NUCB2P80303 420 aa16.82■□□□□ 0.28
AC040174.1-201ENST00000563003 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
AC040174.1-201ENST00000563003 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 OVOS2A0A0J9YW53 1432 aa16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 OVOS2Q6IE36 1432 aa16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 FMN2Q9NZ56 1722 aa16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 PKP1Q13835 747 aa16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 CCDC94Q9BW85 323 aaPredicted RBP16.81■□□□□ 0.28
AC040174.1-201ENST00000563003 IL13P35225 146 aa16.8■□□□□ 0.28
AC040174.1-201ENST00000563003 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
AC040174.1-201ENST00000563003 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
AC040174.1-201ENST00000563003 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
AC040174.1-201ENST00000563003 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 DMTNQ08495 405 aa16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
AC040174.1-201ENST00000563003 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
AC040174.1-201ENST00000563003 LRRC7Q96NW7 1537 aa16.78■□□□□ 0.28
AC040174.1-201ENST00000563003 ZSCAN20P17040 1043 aaPredicted RBP16.78■□□□□ 0.28
AC040174.1-201ENST00000563003 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
AC040174.1-201ENST00000563003 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
AC040174.1-201ENST00000563003 LRSAM1Q6UWE0 723 aa16.77■□□□□ 0.28
AC040174.1-201ENST00000563003 IPO8O15397 1037 aaKnown RBP16.77■□□□□ 0.27
AC040174.1-201ENST00000563003 PRKAR2BP31323 418 aa16.77■□□□□ 0.27
AC040174.1-201ENST00000563003 RABEP1Q15276 862 aa16.76■□□□□ 0.27
AC040174.1-201ENST00000563003 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
AC040174.1-201ENST00000563003 IL16Q14005 1332 aa16.76■□□□□ 0.27
AC040174.1-201ENST00000563003 SYCE3A1L190 88 aa16.76■□□□□ 0.27
AC040174.1-201ENST00000563003 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
AC040174.1-201ENST00000563003 CDC45O75419 566 aa16.75■□□□□ 0.27
AC040174.1-201ENST00000563003 JARID2Q92833 1246 aaPredicted RBP16.74■□□□□ 0.27
AC040174.1-201ENST00000563003 HMOX1P09601 288 aa16.74■□□□□ 0.27
AC040174.1-201ENST00000563003 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
AC040174.1-201ENST00000563003 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
AC040174.1-201ENST00000563003 NSFL1CQ9UNZ2 370 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms