RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 EN1Q05925 392 aaPredicted RBP25.4■■□□□ 1.66
CDH11-206ENST00000562998 PKD1L3Q7Z443 1732 aa25.4■■□□□ 1.66
CDH11-206ENST00000562998 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
CDH11-206ENST00000562998 APBA3O96018 575 aa25.39■■□□□ 1.66
CDH11-206ENST00000562998 TATP17735 454 aaPredicted RBP25.39■■□□□ 1.66
CDH11-206ENST00000562998 PLEKHG2Q9H7P9 1386 aa25.38■■□□□ 1.65
CDH11-206ENST00000562998 RGPD3A6NKT7 1758 aaPredicted RBP25.37■■□□□ 1.65
CDH11-206ENST00000562998 RGPD4Q7Z3J3 1758 aa25.37■■□□□ 1.65
CDH11-206ENST00000562998 PARD3Q8TEW0 1356 aa25.37■■□□□ 1.65
CDH11-206ENST00000562998 IL13P35225 146 aa25.37■■□□□ 1.65
CDH11-206ENST00000562998 DDX54Q8TDD1 881 aaKnown RBP25.36■■□□□ 1.65
CDH11-206ENST00000562998 RREB1Q92766 1687 aa25.36■■□□□ 1.65
CDH11-206ENST00000562998 KCNQ2O43526 872 aa25.35■■□□□ 1.65
CDH11-206ENST00000562998 EZH2Q15910 746 aaKnown RBP25.35■■□□□ 1.65
CDH11-206ENST00000562998 COL3A1P02461 1466 aaPredicted RBP25.34■■□□□ 1.65
CDH11-206ENST00000562998 PLSCR1O15162 318 aa25.34■■□□□ 1.65
CDH11-206ENST00000562998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.34■■□□□ 1.65
CDH11-206ENST00000562998 KDRP35968 1356 aa25.32■■□□□ 1.64
CDH11-206ENST00000562998 CYP27B1O15528 508 aa25.32■■□□□ 1.64
CDH11-206ENST00000562998 PCDH11XQ9BZA7 1347 aa25.32■■□□□ 1.64
CDH11-206ENST00000562998 PCDH11YQ9BZA8 1340 aa25.32■■□□□ 1.64
CDH11-206ENST00000562998 ACSBG1Q96GR2 724 aa25.31■■□□□ 1.64
CDH11-206ENST00000562998 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
CDH11-206ENST00000562998 CNGB1Q14028 1251 aaPredicted RBP25.29■■□□□ 1.64
CDH11-206ENST00000562998 NUP188Q5SRE5 1749 aa25.29■■□□□ 1.64
CDH11-206ENST00000562998 BTAF1O14981 1849 aa25.28■■□□□ 1.64
CDH11-206ENST00000562998 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
CDH11-206ENST00000562998 PPP2R1AP30153 589 aa25.27■■□□□ 1.64
CDH11-206ENST00000562998 NKX1-1Q15270 411 aaPredicted RBP25.27■■□□□ 1.64
CDH11-206ENST00000562998 AEBP1Q8IUX7 1158 aa25.27■■□□□ 1.64
CDH11-206ENST00000562998 PROM2Q8N271 834 aa25.27■■□□□ 1.64
CDH11-206ENST00000562998 DIAPH1O60610 1272 aaKnown RBP25.25■■□□□ 1.63
CDH11-206ENST00000562998 DDX10Q13206 875 aaKnown RBP25.25■■□□□ 1.63
CDH11-206ENST00000562998 TOGARAM1Q9Y4F4 1720 aa25.24■■□□□ 1.63
CDH11-206ENST00000562998 PRIM1P49642 420 aaKnown RBP25.24■■□□□ 1.63
CDH11-206ENST00000562998 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
CDH11-206ENST00000562998 KAT6BQ8WYB5 2073 aa25.23■■□□□ 1.63
CDH11-206ENST00000562998 PHKG2P15735 406 aa25.21■■□□□ 1.63
CDH11-206ENST00000562998 TXNRD1Q16881 649 aa25.19■■□□□ 1.62
CDH11-206ENST00000562998 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
CDH11-206ENST00000562998 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
CDH11-206ENST00000562998 IFNL2Q8IZJ0 200 aa25.19■■□□□ 1.62
CDH11-206ENST00000562998 ITGB4P16144 1822 aa25.18■■□□□ 1.62
CDH11-206ENST00000562998 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
CDH11-206ENST00000562998 LY75O60449 1722 aa25.15■■□□□ 1.62
CDH11-206ENST00000562998 HMOX1P09601 288 aa25.15■■□□□ 1.62
CDH11-206ENST00000562998 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
CDH11-206ENST00000562998 PAPPAQ13219 1627 aa25.14■■□□□ 1.61
CDH11-206ENST00000562998 RALBP1Q15311 655 aa25.13■■□□□ 1.61
CDH11-206ENST00000562998 ZNF530Q6P9A1 599 aaPredicted RBP25.12■■□□□ 1.61
CDH11-206ENST00000562998 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
CDH11-206ENST00000562998 KDM6AO15550 1401 aaPredicted RBP25.12■■□□□ 1.61
CDH11-206ENST00000562998 PSDA5PKW4 1024 aaPredicted RBP25.11■■□□□ 1.61
CDH11-206ENST00000562998 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
CDH11-206ENST00000562998 NBPF14Q5TI25 921 aa25.11■■□□□ 1.61
CDH11-206ENST00000562998 ANO8Q9HCE9 1232 aaPredicted RBP25.11■■□□□ 1.61
CDH11-206ENST00000562998 SRCAPQ6ZRS2 3230 aa25.1■■□□□ 1.61
CDH11-206ENST00000562998 HSP90AB1P08238 724 aaKnown RBP25.1■■□□□ 1.61
CDH11-206ENST00000562998 PIGBQ92521 554 aa25.1■■□□□ 1.61
CDH11-206ENST00000562998 DCAF5Q96JK2 942 aa25.1■■□□□ 1.61
CDH11-206ENST00000562998 U2SURPO15042 1029 aaKnown RBP25.09■■□□□ 1.61
CDH11-206ENST00000562998 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
CDH11-206ENST00000562998 MPRIPQ6WCQ1 1025 aa25.09■■□□□ 1.61
CDH11-206ENST00000562998 ERVV-2B6SEH9 535 aa25.08■■□□□ 1.61
CDH11-206ENST00000562998 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
CDH11-206ENST00000562998 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
CDH11-206ENST00000562998 NUDCQ9Y266 331 aa25.07■■□□□ 1.6
CDH11-206ENST00000562998 ADAMTS7Q9UKP4 1686 aa25.07■■□□□ 1.6
CDH11-206ENST00000562998 MTHFSDQ2M296 383 aaKnown RBP25.06■■□□□ 1.6
CDH11-206ENST00000562998 AKAP4Q5JQC9 854 aa25.06■■□□□ 1.6
CDH11-206ENST00000562998 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
CDH11-206ENST00000562998 SCN11AQ9UI33 1791 aa25.05■■□□□ 1.6
CDH11-206ENST00000562998 TMOD3Q9NYL9 352 aa25.04■■□□□ 1.6
CDH11-206ENST00000562998 PALLDQ8WX93 1383 aa25.04■■□□□ 1.6
CDH11-206ENST00000562998 SLC15A2Q16348 729 aa25.03■■□□□ 1.6
CDH11-206ENST00000562998 FCHSD2O94868 740 aa25.02■■□□□ 1.6
CDH11-206ENST00000562998 SMARCC1Q92922 1105 aaPredicted RBP25.02■■□□□ 1.6
CDH11-206ENST00000562998 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
CDH11-206ENST00000562998 CASZ1Q86V15 1759 aa25.01■■□□□ 1.59
CDH11-206ENST00000562998 U2AF1L5P0DN76 240 aaPredicted RBP25.01■■□□□ 1.59
CDH11-206ENST00000562998 U2AF1Q01081 240 aaKnown RBP eCLIP25.01■■□□□ 1.59
CDH11-206ENST00000562998 AKT1S1Q96B36 256 aa25.01■■□□□ 1.59
CDH11-206ENST00000562998 PRKRIP1Q9H875 184 aaPredicted RBP25.01■■□□□ 1.59
CDH11-206ENST00000562998 PRKAR2BP31323 418 aa25■■□□□ 1.59
CDH11-206ENST00000562998 KCNQ4P56696 695 aa25■■□□□ 1.59
CDH11-206ENST00000562998 PHACTR3Q96KR7 559 aa25■■□□□ 1.59
CDH11-206ENST00000562998 ATG3Q9NT62 314 aa25■■□□□ 1.59
CDH11-206ENST00000562998 STK32BQ9NY57 414 aa25■■□□□ 1.59
CDH11-206ENST00000562998 CCNL1Q9UK58 526 aaPredicted RBP25■■□□□ 1.59
CDH11-206ENST00000562998 ASAP1Q9ULH1 1129 aa25■■□□□ 1.59
CDH11-206ENST00000562998 MRC1P22897 1456 aa25■■□□□ 1.59
CDH11-206ENST00000562998 LRP5O75197 1615 aa25■■□□□ 1.59
CDH11-206ENST00000562998 VIRMAQ69YN4 1812 aaKnown RBP25■■□□□ 1.59
CDH11-206ENST00000562998 ZNF827Q17R98 1081 aa24.99■■□□□ 1.59
CDH11-206ENST00000562998 LGR6Q9HBX8 967 aa24.99■■□□□ 1.59
CDH11-206ENST00000562998 TAF1LQ8IZX4 1826 aa24.98■■□□□ 1.59
CDH11-206ENST00000562998 QSER1Q2KHR3 1735 aa24.98■■□□□ 1.59
CDH11-206ENST00000562998 RNMTO43148 476 aaKnown RBP24.97■■□□□ 1.59
CDH11-206ENST00000562998 CABP4P57796 275 aa24.97■■□□□ 1.59
CDH11-206ENST00000562998 GAS2L2Q8NHY3 880 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms