RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	VAMP4	O75379	141 aa		11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	ABTB2	Q8N961	1025 aa		11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	LAS1L	Q9Y4W2	734 aa	Known RBP	11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	HTATSF1	O43719	755 aa	Known RBP	11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	IGHD	P01880	384 aa		11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	GAS2L2	Q8NHY3	880 aa		11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	NOB1	Q9ULX3	412 aa	Known RBP	11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	TNN	Q9UQP3	1299 aa		11.6	□□□□□ -0.55
PDPR-204	ENST00000562100	RGPD5	Q99666	1765 aa		11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	CRB1	P82279	1406 aa		11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	HOXC9	P31274	260 aa		11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	TWISTNB	Q3B726	338 aa	Predicted RBP	11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	FAM161A	Q3B820	660 aa		11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	KCNH5	Q8NCM2	988 aa		11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	THUMPD2	Q9BTF0	503 aa	Known RBP	11.59	□□□□□ -0.55
PDPR-204	ENST00000562100	KDM3B	Q7LBC6	1761 aa		11.58	□□□□□ -0.56
PDPR-204	ENST00000562100	CRYBG1	Q9Y4K1	1723 aa		11.58	□□□□□ -0.56
PDPR-204	ENST00000562100	MRPL50	Q8N5N7	158 aa	Known RBP	11.58	□□□□□ -0.56
PDPR-204	ENST00000562100	PXDN	Q92626	1479 aa		11.58	□□□□□ -0.56
PDPR-204	ENST00000562100	CHL1	O00533	1208 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	SOX12	O15370	315 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	PAK3	O75914	559 aa	Predicted RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	HDAC1	Q13547	482 aa	Predicted RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	ITPRIP	Q8IWB1	547 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	EYA1	Q99502	592 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	PCDHB15	Q9Y5E8	787 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	MED1	Q15648	1581 aa	Predicted RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	FAM83G	A6ND36	823 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	MSH5	O43196	834 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	PSME1	Q06323	249 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	ESCO1	Q5FWF5	840 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	IPO9	Q96P70	1041 aa	Known RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	ANP32E	Q9BTT0	268 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	API5	Q9BZZ5	524 aa	Known RBP	11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	ABCC6	O95255	1503 aa		11.57	□□□□□ -0.56
PDPR-204	ENST00000562100	ABCC4	O15439	1325 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	MYT1	Q01538	1121 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	ERICH6	Q7L0X2	663 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	TMEM57	Q8N5G2	664 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	RTF1	Q92541	710 aa	Known RBP	11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	IP6K1	Q92551	441 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	ORAI2	Q96SN7	254 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	NCAPD2	Q15021	1401 aa		11.56	□□□□□ -0.56
PDPR-204	ENST00000562100	SOS1	Q07889	1333 aa	Predicted RBP	11.55	□□□□□ -0.56
PDPR-204	ENST00000562100	ZBTB40	Q9NUA8	1239 aa		11.55	□□□□□ -0.56
PDPR-204	ENST00000562100	SIPA1L3	O60292	1781 aa	Predicted RBP	11.55	□□□□□ -0.56
PDPR-204	ENST00000562100	USP19	O94966	1318 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	SOS2	Q07890	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	RGS3	P49796	1198 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	DCTN1	Q14203	1278 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	TSPYL6	Q8N831	410 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	C8orf58	Q8NAV2	365 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	BABAM1	Q9NWV8	329 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	MAP3K5	Q99683	1374 aa		11.54	□□□□□ -0.56
PDPR-204	ENST00000562100	MTHFSD	Q2M296	383 aa	Known RBP	11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	C8orf34	Q49A92	452 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	NOP58	Q9Y2X3	529 aa	Known RBP	11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	JCAD	Q9P266	1359 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	OVOS2	A0A0G2JMS6	1433 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	ADAMTS7	Q9UKP4	1686 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	NUTM2G	Q5VZR2	741 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	MCM10	Q7L590	875 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	SKAP1	Q86WV1	359 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	DDRGK1	Q96HY6	314 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	COL18A1	P39060	1754 aa		11.53	□□□□□ -0.56
PDPR-204	ENST00000562100	PTPRC	P08575	1304 aa		11.52	□□□□□ -0.57
PDPR-204	ENST00000562100	GNAT3	A8MTJ3	354 aa		11.52	□□□□□ -0.57
PDPR-204	ENST00000562100	SMC5	Q8IY18	1101 aa		11.52	□□□□□ -0.57
PDPR-204	ENST00000562100	PDZRN3	Q9UPQ7	1066 aa		11.52	□□□□□ -0.57
PDPR-204	ENST00000562100	ABCA3	Q99758	1704 aa		11.52	□□□□□ -0.57
PDPR-204	ENST00000562100	NPHP3	Q7Z494	1330 aa		11.51	□□□□□ -0.57
PDPR-204	ENST00000562100	LRP6	O75581	1613 aa		11.51	□□□□□ -0.57
PDPR-204	ENST00000562100	DDX17	Q92841	729 aa	Known RBP	11.51	□□□□□ -0.57
PDPR-204	ENST00000562100	SCN11A	Q9UI33	1791 aa		11.51	□□□□□ -0.57
PDPR-204	ENST00000562100	PLEKHG2	Q9H7P9	1386 aa		11.5	□□□□□ -0.57
PDPR-204	ENST00000562100	TSPYL4	Q9UJ04	414 aa		11.5	□□□□□ -0.57
PDPR-204	ENST00000562100	RGS12	O14924	1447 aa		11.5	□□□□□ -0.57
PDPR-204	ENST00000562100	ZBTB7B	O15156	539 aa	Predicted RBP	11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	ELL2	O00472	640 aa	Predicted RBP	11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	INTS3	Q68E01	1043 aa	Known RBP	11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	KRT28	Q7Z3Y7	464 aa		11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	ARHGEF25	Q86VW2	580 aa		11.49	□□□□□ -0.57
PDPR-204	ENST00000562100	PXDNL	A1KZ92	1463 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	CEMIP	Q8WUJ3	1361 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	FOXO3	O43524	673 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	GC	P02774	474 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	NPM2	Q86SE8	214 aa	Known RBP	11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	GCC1	Q96CN9	775 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	TNS3	Q68CZ2	1445 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	PKD1L3	Q7Z443	1732 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	SPATA31A6	Q5VVP1	1343 aa		11.48	□□□□□ -0.57
PDPR-204	ENST00000562100	LRRC59	Q96AG4	307 aa	Known RBP	11.47	□□□□□ -0.57
PDPR-204	ENST00000562100	LTV1	Q96GA3	475 aa	Predicted RBP	11.47	□□□□□ -0.57
PDPR-204	ENST00000562100	CHMP4A	Q9BY43	222 aa		11.47	□□□□□ -0.57
PDPR-204	ENST00000562100	AMOT	Q4VCS5	1084 aa		11.46	□□□□□ -0.57
PDPR-204	ENST00000562100	PARP4	Q9UKK3	1724 aa	Known RBP	11.46	□□□□□ -0.57
PDPR-204	ENST00000562100	TAF7	Q15545	349 aa	Predicted RBP	11.46	□□□□□ -0.58
PDPR-204	ENST00000562100	SPATA31A3	Q5VYP0	1347 aa		11.45	□□□□□ -0.58

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