RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
GINS3-204ENST00000561952 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 MAP3K19Q56UN5 1328 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 C11orf95C9JLR9 678 aaPredicted RBP11.5□□□□□ -0.57
GINS3-204ENST00000561952 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
GINS3-204ENST00000561952 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
GINS3-204ENST00000561952 IP6K1Q92551 441 aa11.5□□□□□ -0.57
GINS3-204ENST00000561952 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
GINS3-204ENST00000561952 BTAF1O14981 1849 aa11.49□□□□□ -0.57
GINS3-204ENST00000561952 KCNQ2O43526 872 aa11.49□□□□□ -0.57
GINS3-204ENST00000561952 HOXC9P31274 260 aa11.49□□□□□ -0.57
GINS3-204ENST00000561952 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
GINS3-204ENST00000561952 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
GINS3-204ENST00000561952 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
GINS3-204ENST00000561952 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
GINS3-204ENST00000561952 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
GINS3-204ENST00000561952 SHANK3Q9BYB0 1731 aa11.47□□□□□ -0.57
GINS3-204ENST00000561952 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
GINS3-204ENST00000561952 FYB1O15117 783 aa11.47□□□□□ -0.57
GINS3-204ENST00000561952 DDX54Q8TDD1 881 aaKnown RBP11.47□□□□□ -0.57
GINS3-204ENST00000561952 MEGF6O75095 1541 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 BCL9O00512 1426 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 SMG6Q86US8 1419 aaKnown RBP11.45□□□□□ -0.58
GINS3-204ENST00000561952 RTL1A6NKG5 1358 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 PLSCR1O15162 318 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
GINS3-204ENST00000561952 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
GINS3-204ENST00000561952 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
GINS3-204ENST00000561952 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
GINS3-204ENST00000561952 PROM2Q8N271 834 aa11.44□□□□□ -0.58
GINS3-204ENST00000561952 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
GINS3-204ENST00000561952 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
GINS3-204ENST00000561952 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
GINS3-204ENST00000561952 MAP2P11137 1827 aaKnown RBP11.44□□□□□ -0.58
GINS3-204ENST00000561952 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
GINS3-204ENST00000561952 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
GINS3-204ENST00000561952 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
GINS3-204ENST00000561952 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
GINS3-204ENST00000561952 TNNT2P45379 298 aaPredicted RBP11.42□□□□□ -0.58
GINS3-204ENST00000561952 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
GINS3-204ENST00000561952 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
GINS3-204ENST00000561952 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
GINS3-204ENST00000561952 STK32BQ9NY57 414 aa11.42□□□□□ -0.58
GINS3-204ENST00000561952 ANKRD26Q9UPS8 1709 aa11.42□□□□□ -0.58
GINS3-204ENST00000561952 FLT4P35916 1363 aa11.41□□□□□ -0.58
GINS3-204ENST00000561952 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
GINS3-204ENST00000561952 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
GINS3-204ENST00000561952 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
GINS3-204ENST00000561952 RAPGEF4Q8WZA2 1011 aa11.4□□□□□ -0.58
GINS3-204ENST00000561952 INSRP06213 1382 aa11.4□□□□□ -0.59
GINS3-204ENST00000561952 CGNL1Q0VF96 1302 aa11.39□□□□□ -0.59
GINS3-204ENST00000561952 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
GINS3-204ENST00000561952 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
GINS3-204ENST00000561952 KCNQ4P56696 695 aa11.39□□□□□ -0.59
GINS3-204ENST00000561952 SLC15A2Q16348 729 aa11.39□□□□□ -0.59
GINS3-204ENST00000561952 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
GINS3-204ENST00000561952 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
GINS3-204ENST00000561952 LY75O60449 1722 aa11.38□□□□□ -0.59
GINS3-204ENST00000561952 PANK3Q9H999 370 aa11.37□□□□□ -0.59
GINS3-204ENST00000561952 LRRC4BQ9NT99 713 aa11.37□□□□□ -0.59
GINS3-204ENST00000561952 TOGARAM1Q9Y4F4 1720 aa11.37□□□□□ -0.59
GINS3-204ENST00000561952 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
GINS3-204ENST00000561952 ITGB4P16144 1822 aa11.36□□□□□ -0.59
GINS3-204ENST00000561952 NSD2O96028 1365 aa11.36□□□□□ -0.59
GINS3-204ENST00000561952 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
GINS3-204ENST00000561952 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
GINS3-204ENST00000561952 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
GINS3-204ENST00000561952 POLKQ9UBT6 870 aa11.34□□□□□ -0.59
GINS3-204ENST00000561952 C5P01031 1676 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 UTRNP46939 3433 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 QSER1Q2KHR3 1735 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 MPRIPQ6WCQ1 1025 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
GINS3-204ENST00000561952 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
GINS3-204ENST00000561952 CYP27B1O15528 508 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 PTGER2P43116 358 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
GINS3-204ENST00000561952 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 EYA1Q99502 592 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 TFCP2L1Q9NZI6 479 aa11.32□□□□□ -0.6
GINS3-204ENST00000561952 TAF1LQ8IZX4 1826 aa11.31□□□□□ -0.6
GINS3-204ENST00000561952 EVX2Q03828 476 aa11.31□□□□□ -0.6
GINS3-204ENST00000561952 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
GINS3-204ENST00000561952 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
GINS3-204ENST00000561952 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
GINS3-204ENST00000561952 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
GINS3-204ENST00000561952 KNSTRNQ9Y448 316 aa11.29□□□□□ -0.6
GINS3-204ENST00000561952 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
GINS3-204ENST00000561952 GOLGB1Q14789 3259 aaKnown RBP11.28□□□□□ -0.6
GINS3-204ENST00000561952 ARXQ96QS3 562 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms