RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
CRTC3-210ENST00000560927 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.51
CRTC3-210ENST00000560927 IL27Q8NEV9 243 aa18.27■□□□□ 0.51
CRTC3-210ENST00000560927 EYA1Q99502 592 aa18.27■□□□□ 0.51
CRTC3-210ENST00000560927 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.51
CRTC3-210ENST00000560927 AMPHP49418 695 aa18.26■□□□□ 0.51
CRTC3-210ENST00000560927 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
CRTC3-210ENST00000560927 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
CRTC3-210ENST00000560927 ATP10DQ9P241 1426 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 KDRP35968 1356 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 MSH6P52701 1360 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 KCNA6P17658 529 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
CRTC3-210ENST00000560927 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 TBC1D9Q6ZT07 1266 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 DCTPP1Q9H773 170 aa18.25■□□□□ 0.51
CRTC3-210ENST00000560927 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
CRTC3-210ENST00000560927 IGSF1Q8N6C5 1336 aa18.24■□□□□ 0.51
CRTC3-210ENST00000560927 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
CRTC3-210ENST00000560927 NLRP6P59044 892 aa18.24■□□□□ 0.51
CRTC3-210ENST00000560927 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
CRTC3-210ENST00000560927 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
CRTC3-210ENST00000560927 PTPRCP08575 1304 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 GSPT1P15170 499 aaKnown RBP18.23■□□□□ 0.51
CRTC3-210ENST00000560927 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 MEIS3Q99687 375 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
CRTC3-210ENST00000560927 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 HSCBQ8IWL3 235 aa18.23■□□□□ 0.51
CRTC3-210ENST00000560927 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
CRTC3-210ENST00000560927 G2E3Q7L622 706 aa18.22■□□□□ 0.51
CRTC3-210ENST00000560927 KIF2CQ99661 725 aa18.22■□□□□ 0.51
CRTC3-210ENST00000560927 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
CRTC3-210ENST00000560927 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
CRTC3-210ENST00000560927 OTUD7AQ8TE49 926 aaPredicted RBP18.2■□□□□ 0.5
CRTC3-210ENST00000560927 F6X3S4 739 aa18.2■□□□□ 0.5
CRTC3-210ENST00000560927 HOXC9P31274 260 aa18.2■□□□□ 0.5
CRTC3-210ENST00000560927 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
CRTC3-210ENST00000560927 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
CRTC3-210ENST00000560927 CHMP5Q9NZZ3 219 aa18.19■□□□□ 0.5
CRTC3-210ENST00000560927 SNX21Q969T3 373 aa18.18■□□□□ 0.5
CRTC3-210ENST00000560927 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
CRTC3-210ENST00000560927 APBB1O00213 710 aa18.18■□□□□ 0.5
CRTC3-210ENST00000560927 CDC45O75419 566 aa18.18■□□□□ 0.5
CRTC3-210ENST00000560927 SLC4A10Q6U841 1118 aa18.18■□□□□ 0.5
CRTC3-210ENST00000560927 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
CRTC3-210ENST00000560927 ABTB2Q8N961 1025 aa18.17■□□□□ 0.5
CRTC3-210ENST00000560927 NCOA3Q9Y6Q9 1424 aa18.17■□□□□ 0.5
CRTC3-210ENST00000560927 MARF1Q9Y4F3 1742 aaKnown RBP18.17■□□□□ 0.5
CRTC3-210ENST00000560927 CD2BP2O95400 341 aaKnown RBP18.17■□□□□ 0.5
CRTC3-210ENST00000560927 TTC22Q5TAA0 569 aa18.16■□□□□ 0.5
CRTC3-210ENST00000560927 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
CRTC3-210ENST00000560927 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
CRTC3-210ENST00000560927 NWD1Q149M9 1564 aa18.16■□□□□ 0.5
CRTC3-210ENST00000560927 MCM4P33991 863 aa18.16■□□□□ 0.5
CRTC3-210ENST00000560927 DDIT3P35638 169 aa18.15■□□□□ 0.5
CRTC3-210ENST00000560927 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
CRTC3-210ENST00000560927 GNAT3A8MTJ3 354 aa18.14■□□□□ 0.5
CRTC3-210ENST00000560927 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.5
CRTC3-210ENST00000560927 C14orf37Q86TY3 774 aa18.14■□□□□ 0.49
CRTC3-210ENST00000560927 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
CRTC3-210ENST00000560927 USHBP1Q8N6Y0 703 aa18.13■□□□□ 0.49
CRTC3-210ENST00000560927 IL17REQ8NFR9 667 aa18.13■□□□□ 0.49
CRTC3-210ENST00000560927 LRRC37A3O60309 1634 aa18.13■□□□□ 0.49
CRTC3-210ENST00000560927 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
CRTC3-210ENST00000560927 HSP90AB1P08238 724 aaKnown RBP18.12■□□□□ 0.49
CRTC3-210ENST00000560927 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
CRTC3-210ENST00000560927 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
CRTC3-210ENST00000560927 SDSP20132 328 aa18.11■□□□□ 0.49
CRTC3-210ENST00000560927 MAP3K5Q99683 1374 aa18.1■□□□□ 0.49
CRTC3-210ENST00000560927 FLIIQ13045 1269 aa18.1■□□□□ 0.49
CRTC3-210ENST00000560927 PHF8Q9UPP1 1060 aa18.1■□□□□ 0.49
CRTC3-210ENST00000560927 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
CRTC3-210ENST00000560927 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
CRTC3-210ENST00000560927 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
CRTC3-210ENST00000560927 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
CRTC3-210ENST00000560927 K7ELQ4 463 aaPredicted RBP18.08■□□□□ 0.49
CRTC3-210ENST00000560927 FAM208AQ9UK61 1670 aaKnown RBP18.08■□□□□ 0.48
CRTC3-210ENST00000560927 HMMRO75330 724 aa18.08■□□□□ 0.48
CRTC3-210ENST00000560927 GNAI2P04899 355 aa18.07■□□□□ 0.48
CRTC3-210ENST00000560927 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
CRTC3-210ENST00000560927 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
CRTC3-210ENST00000560927 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
CRTC3-210ENST00000560927 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
CRTC3-210ENST00000560927 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
CRTC3-210ENST00000560927 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
CRTC3-210ENST00000560927 TRAK2O60296 914 aa18.05■□□□□ 0.48
CRTC3-210ENST00000560927 HSP90AA1P07900 732 aaKnown RBP18.05■□□□□ 0.48
CRTC3-210ENST00000560927 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
CRTC3-210ENST00000560927 NBPF6Q5VWK0 638 aa18.05■□□□□ 0.48
CRTC3-210ENST00000560927 ANKLE2Q86XL3 938 aa18.05■□□□□ 0.48
CRTC3-210ENST00000560927 NBPF4Q96M43 638 aa18.05■□□□□ 0.48
CRTC3-210ENST00000560927 LTN1O94822 1766 aa18.04■□□□□ 0.48
CRTC3-210ENST00000560927 IP6K1Q92551 441 aa18.04■□□□□ 0.48
CRTC3-210ENST00000560927 CHD2O14647 1828 aaKnown RBP18.04■□□□□ 0.48
CRTC3-210ENST00000560927 PDE1AP54750 535 aa18.04■□□□□ 0.48
CRTC3-210ENST00000560927 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
CRTC3-210ENST00000560927 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
CRTC3-210ENST00000560927 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms