RNA–Protein interactions for RNA: ENST00000560883.1

TM2D3-212, Transcript of TM2 domain containing 3, humanhuman

TSL 3

Gene TM2D3, Length 867 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-212ENST00000560883 MTMR7Q9Y216 660 aa9.01□□□□□ -0.97
TM2D3-212ENST00000560883 TCOF1Q13428 1488 aaKnown RBP9.01□□□□□ -0.97
TM2D3-212ENST00000560883 ZNF142P52746 1687 aaPredicted RBP9□□□□□ -0.97
TM2D3-212ENST00000560883 SAMD9LQ8IVG5 1584 aa9□□□□□ -0.97
TM2D3-212ENST00000560883 FMN1Q68DA7 1419 aa9□□□□□ -0.97
TM2D3-212ENST00000560883 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
TM2D3-212ENST00000560883 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
TM2D3-212ENST00000560883 ATP13A2Q9NQ11 1180 aa9□□□□□ -0.97
TM2D3-212ENST00000560883 SPAG9O60271 1321 aaKnown RBP9□□□□□ -0.97
TM2D3-212ENST00000560883 EEA1Q15075 1411 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 DXOO77932 396 aaKnown RBP8.99□□□□□ -0.97
TM2D3-212ENST00000560883 CD46P15529 392 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 RBM25P49756 843 aaKnown RBP8.99□□□□□ -0.97
TM2D3-212ENST00000560883 MRGPRX2Q96LB1 330 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 USB1Q9BQ65 265 aaKnown RBP8.99□□□□□ -0.97
TM2D3-212ENST00000560883 SENP2Q9HC62 589 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 PLA2R1Q13018 1463 aa8.99□□□□□ -0.97
TM2D3-212ENST00000560883 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
TM2D3-212ENST00000560883 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
TM2D3-212ENST00000560883 RGS17Q9UGC6 210 aaPredicted RBP8.98□□□□□ -0.97
TM2D3-212ENST00000560883 SYCP2Q9BX26 1530 aa8.98□□□□□ -0.97
TM2D3-212ENST00000560883 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
TM2D3-212ENST00000560883 SHANK2Q9UPX8 1470 aa8.97□□□□□ -0.97
TM2D3-212ENST00000560883 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
TM2D3-212ENST00000560883 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
TM2D3-212ENST00000560883 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
TM2D3-212ENST00000560883 POLR1AO95602 1720 aaPredicted RBP8.97□□□□□ -0.97
TM2D3-212ENST00000560883 NEURL4Q96JN8 1562 aa8.96□□□□□ -0.97
TM2D3-212ENST00000560883 J3QL48 77 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 KDM4AO75164 1064 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 USP46P62068 366 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 ZNF428Q96B54 188 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 TRAIPQ9BWF2 469 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.96□□□□□ -0.98
TM2D3-212ENST00000560883 STRCP1A6NGW2 1772 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 A2MP01023 1474 aa8.96□□□□□ -0.98
TM2D3-212ENST00000560883 ATP7AQ04656 1500 aa8.95□□□□□ -0.98
TM2D3-212ENST00000560883 WNT7BP56706 349 aa8.95□□□□□ -0.98
TM2D3-212ENST00000560883 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
TM2D3-212ENST00000560883 CCDC82Q8N4S0 544 aa8.95□□□□□ -0.98
TM2D3-212ENST00000560883 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
TM2D3-212ENST00000560883 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
TM2D3-212ENST00000560883 A2ML1A8K2U0 1454 aa8.95□□□□□ -0.98
TM2D3-212ENST00000560883 TERTO14746 1132 aaKnown RBP8.94□□□□□ -0.98
TM2D3-212ENST00000560883 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
TM2D3-212ENST00000560883 AEBP1Q8IUX7 1158 aa8.94□□□□□ -0.98
TM2D3-212ENST00000560883 ZNF644Q9H582 1327 aaPredicted RBP8.94□□□□□ -0.98
TM2D3-212ENST00000560883 CPS1P31327 1500 aa8.94□□□□□ -0.98
TM2D3-212ENST00000560883 VWDEQ8N2E2 1590 aa8.94□□□□□ -0.98
TM2D3-212ENST00000560883 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
TM2D3-212ENST00000560883 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
TM2D3-212ENST00000560883 ANKLE2Q86XL3 938 aa8.93□□□□□ -0.98
TM2D3-212ENST00000560883 HPS1Q92902 700 aa8.93□□□□□ -0.98
TM2D3-212ENST00000560883 GPATCH8Q9UKJ3 1502 aaKnown RBP8.93□□□□□ -0.98
TM2D3-212ENST00000560883 PLXNC1O60486 1568 aa8.93□□□□□ -0.98
TM2D3-212ENST00000560883 CFAP65Q6ZU64 1925 aaKnown RBP8.92□□□□□ -0.98
TM2D3-212ENST00000560883 TNRQ92752 1358 aa8.92□□□□□ -0.98
TM2D3-212ENST00000560883 MAP2K5Q13163 448 aa8.92□□□□□ -0.98
TM2D3-212ENST00000560883 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
TM2D3-212ENST00000560883 GPBP1L1Q9HC44 474 aaPredicted RBP8.92□□□□□ -0.98
TM2D3-212ENST00000560883 CFDP1Q9UEE9 299 aaPredicted RBP8.92□□□□□ -0.98
TM2D3-212ENST00000560883 INO80Q9ULG1 1556 aaPredicted RBP8.91□□□□□ -0.98
TM2D3-212ENST00000560883 KIF3BO15066 747 aa8.91□□□□□ -0.98
TM2D3-212ENST00000560883 MFAP1P55081 439 aaKnown RBP8.91□□□□□ -0.98
TM2D3-212ENST00000560883 NPHP4O75161 1426 aaPredicted RBP8.9□□□□□ -0.98
TM2D3-212ENST00000560883 IRF6O14896 467 aa8.9□□□□□ -0.98
TM2D3-212ENST00000560883 ZMYND10O75800 440 aa8.9□□□□□ -0.98
TM2D3-212ENST00000560883 SKOR1P84550 965 aa8.9□□□□□ -0.98
TM2D3-212ENST00000560883 SETD1AO15047 1707 aaKnown RBP8.9□□□□□ -0.98
TM2D3-212ENST00000560883 ADGBQ8N7X0 1667 aa8.9□□□□□ -0.98
TM2D3-212ENST00000560883 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.99
TM2D3-212ENST00000560883 CASKIN1Q8WXD9 1431 aa8.89□□□□□ -0.99
TM2D3-212ENST00000560883 HOXA2O43364 376 aa8.89□□□□□ -0.99
TM2D3-212ENST00000560883 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
TM2D3-212ENST00000560883 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
TM2D3-212ENST00000560883 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
TM2D3-212ENST00000560883 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
TM2D3-212ENST00000560883 IQGAP1P46940 1657 aa8.88□□□□□ -0.99
TM2D3-212ENST00000560883 WASHC2CQ9Y4E1 1318 aa8.88□□□□□ -0.99
TM2D3-212ENST00000560883 THEMISQ8N1K5 641 aaPredicted RBP8.88□□□□□ -0.99
TM2D3-212ENST00000560883 UGGT1Q9NYU2 1555 aa8.87□□□□□ -0.99
TM2D3-212ENST00000560883 MINK1Q8N4C8 1332 aaPredicted RBP8.87□□□□□ -0.99
TM2D3-212ENST00000560883 JUNDP17535 347 aa8.87□□□□□ -0.99
TM2D3-212ENST00000560883 HLA-CQ95604 372 aa8.87□□□□□ -0.99
TM2D3-212ENST00000560883 KIAA1107Q9UPP5 1409 aa8.87□□□□□ -0.99
TM2D3-212ENST00000560883 XIRP1Q702N8 1843 aaKnown RBP8.87□□□□□ -0.99
TM2D3-212ENST00000560883 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
TM2D3-212ENST00000560883 MIA2Q96PC5 1412 aa8.86□□□□□ -0.99
TM2D3-212ENST00000560883 DHX29Q7Z478 1369 aaKnown RBP8.86□□□□□ -0.99
TM2D3-212ENST00000560883 PZPP20742 1482 aa8.85□□□□□ -0.99
TM2D3-212ENST00000560883 RNF17Q9BXT8 1623 aaKnown RBP8.85□□□□□ -0.99
TM2D3-212ENST00000560883 E9PSI1 815 aa8.85□□□□□ -0.99
TM2D3-212ENST00000560883 SIAH2O43255 324 aa8.85□□□□□ -0.99
TM2D3-212ENST00000560883 ALDH1A1P00352 501 aa8.85□□□□□ -0.99
TM2D3-212ENST00000560883 GZF1Q9H116 711 aaPredicted RBP8.85□□□□□ -0.99
TM2D3-212ENST00000560883 FAM135AQ9P2D6 1515 aa8.85□□□□□ -0.99
TM2D3-212ENST00000560883 MED14O60244 1454 aa8.84□□□□□ -0.99
TM2D3-212ENST00000560883 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
TM2D3-212ENST00000560883 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms