RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CAMKK2Q96RR4 588 aa20.75■□□□□ 0.91
SNRPA1-213ENST00000560856 APBA3O96018 575 aa20.74■□□□□ 0.91
SNRPA1-213ENST00000560856 IL13P35225 146 aa20.74■□□□□ 0.91
SNRPA1-213ENST00000560856 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-213ENST00000560856 SHANK3Q9BYB0 1731 aa20.74■□□□□ 0.91
SNRPA1-213ENST00000560856 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-213ENST00000560856 KCNQ2O43526 872 aa20.72■□□□□ 0.91
SNRPA1-213ENST00000560856 EZH2Q15910 746 aaKnown RBP20.71■□□□□ 0.91
SNRPA1-213ENST00000560856 CYP27B1O15528 508 aa20.69■□□□□ 0.9
SNRPA1-213ENST00000560856 DDX10Q13206 875 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-213ENST00000560856 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
SNRPA1-213ENST00000560856 PLSCR1O15162 318 aa20.68■□□□□ 0.9
SNRPA1-213ENST00000560856 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
SNRPA1-213ENST00000560856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNRPA1-213ENST00000560856 COL3A1P02461 1466 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-213ENST00000560856 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
SNRPA1-213ENST00000560856 KDRP35968 1356 aa20.67■□□□□ 0.9
SNRPA1-213ENST00000560856 PARD3Q8TEW0 1356 aa20.67■□□□□ 0.9
SNRPA1-213ENST00000560856 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
SNRPA1-213ENST00000560856 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
SNRPA1-213ENST00000560856 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
SNRPA1-213ENST00000560856 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
SNRPA1-213ENST00000560856 NHSQ6T4R5 1651 aa20.66■□□□□ 0.9
SNRPA1-213ENST00000560856 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-213ENST00000560856 PROM2Q8N271 834 aa20.65■□□□□ 0.9
SNRPA1-213ENST00000560856 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
SNRPA1-213ENST00000560856 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
SNRPA1-213ENST00000560856 SPG7Q9UQ90 795 aa20.64■□□□□ 0.89
SNRPA1-213ENST00000560856 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-213ENST00000560856 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-213ENST00000560856 RREB1Q92766 1687 aa20.61■□□□□ 0.89
SNRPA1-213ENST00000560856 RGPD3A6NKT7 1758 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-213ENST00000560856 RGPD4Q7Z3J3 1758 aa20.6■□□□□ 0.89
SNRPA1-213ENST00000560856 PHKG2P15735 406 aa20.6■□□□□ 0.89
SNRPA1-213ENST00000560856 BTAF1O14981 1849 aa20.59■□□□□ 0.89
SNRPA1-213ENST00000560856 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.89
SNRPA1-213ENST00000560856 HMOX1P09601 288 aa20.58■□□□□ 0.89
SNRPA1-213ENST00000560856 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-213ENST00000560856 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
SNRPA1-213ENST00000560856 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
SNRPA1-213ENST00000560856 AMOTQ4VCS5 1084 aa20.57■□□□□ 0.88
SNRPA1-213ENST00000560856 NUP188Q5SRE5 1749 aa20.57■□□□□ 0.88
SNRPA1-213ENST00000560856 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-213ENST00000560856 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
SNRPA1-213ENST00000560856 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
SNRPA1-213ENST00000560856 ZNF316A6NFI3 1004 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-213ENST00000560856 RALBP1Q15311 655 aa20.54■□□□□ 0.88
SNRPA1-213ENST00000560856 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-213ENST00000560856 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-213ENST00000560856 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
SNRPA1-213ENST00000560856 PIGBQ92521 554 aa20.52■□□□□ 0.88
SNRPA1-213ENST00000560856 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
SNRPA1-213ENST00000560856 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
SNRPA1-213ENST00000560856 R3HDM1Q15032 1099 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-213ENST00000560856 MPRIPQ6WCQ1 1025 aa20.51■□□□□ 0.87
SNRPA1-213ENST00000560856 KDM6AO15550 1401 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-213ENST00000560856 ITGB4P16144 1822 aa20.5■□□□□ 0.87
SNRPA1-213ENST00000560856 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-213ENST00000560856 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
SNRPA1-213ENST00000560856 RSPH6AQ9H0K4 717 aa20.5■□□□□ 0.87
SNRPA1-213ENST00000560856 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
SNRPA1-213ENST00000560856 NBPF14Q5TI25 921 aa20.49■□□□□ 0.87
SNRPA1-213ENST00000560856 NUDCQ9Y266 331 aa20.49■□□□□ 0.87
SNRPA1-213ENST00000560856 ERVV-2B6SEH9 535 aa20.48■□□□□ 0.87
SNRPA1-213ENST00000560856 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
SNRPA1-213ENST00000560856 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
SNRPA1-213ENST00000560856 SLC27A3Q5K4L6 730 aa20.47■□□□□ 0.87
SNRPA1-213ENST00000560856 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-213ENST00000560856 LY75O60449 1722 aa20.47■□□□□ 0.87
SNRPA1-213ENST00000560856 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
SNRPA1-213ENST00000560856 KCNQ4P56696 695 aa20.46■□□□□ 0.87
SNRPA1-213ENST00000560856 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
SNRPA1-213ENST00000560856 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
SNRPA1-213ENST00000560856 SRCAPQ6ZRS2 3230 aa20.46■□□□□ 0.87
SNRPA1-213ENST00000560856 PAPPAQ13219 1627 aa20.45■□□□□ 0.87
SNRPA1-213ENST00000560856 FCHSD2O94868 740 aa20.45■□□□□ 0.86
SNRPA1-213ENST00000560856 PRKAR2BP31323 418 aa20.45■□□□□ 0.86
SNRPA1-213ENST00000560856 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
SNRPA1-213ENST00000560856 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
SNRPA1-213ENST00000560856 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
SNRPA1-213ENST00000560856 ASAP1Q9ULH1 1129 aa20.44■□□□□ 0.86
SNRPA1-213ENST00000560856 PALLDQ8WX93 1383 aa20.44■□□□□ 0.86
SNRPA1-213ENST00000560856 SLC15A2Q16348 729 aa20.43■□□□□ 0.86
SNRPA1-213ENST00000560856 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
SNRPA1-213ENST00000560856 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
SNRPA1-213ENST00000560856 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
SNRPA1-213ENST00000560856 AKT1S1Q96B36 256 aa20.42■□□□□ 0.86
SNRPA1-213ENST00000560856 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-213ENST00000560856 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-213ENST00000560856 STK32BQ9NY57 414 aa20.41■□□□□ 0.86
SNRPA1-213ENST00000560856 CABP4P57796 275 aa20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 GAS2L2Q8NHY3 880 aa20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
SNRPA1-213ENST00000560856 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
SNRPA1-213ENST00000560856 PLEKHF1Q96S99 279 aa20.38■□□□□ 0.85
SNRPA1-213ENST00000560856 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
SNRPA1-213ENST00000560856 SIK1P57059 783 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms