RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, human

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-209	ENST00000560762	DDX54	Q8TDD1	881 aa	Known RBP	29.67	■■■□□ 2.34
NIPA2-209	ENST00000560762	BAG6	P46379	1132 aa		29.66	■■■□□ 2.34
NIPA2-209	ENST00000560762	COL3A1	P02461	1466 aa	Predicted RBP	29.63	■■■□□ 2.33
NIPA2-209	ENST00000560762	PPP2R1A	P30153	589 aa		29.63	■■■□□ 2.33
NIPA2-209	ENST00000560762	BCL11B	Q9C0K0	894 aa	Predicted RBP	29.63	■■■□□ 2.33
NIPA2-209	ENST00000560762	PKD1L3	Q7Z443	1732 aa		29.62	■■■□□ 2.33
NIPA2-209	ENST00000560762	APBA3	O96018	575 aa		29.62	■■■□□ 2.33
NIPA2-209	ENST00000560762	PTF1A	Q7RTS3	328 aa		29.62	■■■□□ 2.33
NIPA2-209	ENST00000560762	PARD3	Q8TEW0	1356 aa		29.62	■■■□□ 2.33
NIPA2-209	ENST00000560762	EN1	Q05925	392 aa	Predicted RBP	29.61	■■■□□ 2.33
NIPA2-209	ENST00000560762	PLEKHG2	Q9H7P9	1386 aa		29.61	■■■□□ 2.33
NIPA2-209	ENST00000560762	DIAPH1	O60610	1272 aa	Known RBP	29.6	■■■□□ 2.33
NIPA2-209	ENST00000560762	PCDH11X	Q9BZA7	1347 aa		29.6	■■■□□ 2.33
NIPA2-209	ENST00000560762	PCDH11Y	Q9BZA8	1340 aa		29.6	■■■□□ 2.33
NIPA2-209	ENST00000560762	AEBP1	Q8IUX7	1158 aa		29.59	■■■□□ 2.33
NIPA2-209	ENST00000560762	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	29.59	■■■□□ 2.33
NIPA2-209	ENST00000560762	KDR	P35968	1356 aa		29.59	■■■□□ 2.33
NIPA2-209	ENST00000560762	KCNQ2	O43526	872 aa		29.58	■■■□□ 2.33
NIPA2-209	ENST00000560762	NHS	Q6T4R5	1651 aa		29.58	■■■□□ 2.33
NIPA2-209	ENST00000560762	ACSBG1	Q96GR2	724 aa		29.58	■■■□□ 2.33
NIPA2-209	ENST00000560762	CYP27B1	O15528	508 aa		29.57	■■■□□ 2.32
NIPA2-209	ENST00000560762	SULT6B1	Q6IMI4	303 aa		29.57	■■■□□ 2.32
NIPA2-209	ENST00000560762	SPG7	Q9UQ90	795 aa		29.57	■■■□□ 2.32
NIPA2-209	ENST00000560762	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.56	■■■□□ 2.32
NIPA2-209	ENST00000560762	CAMKK2	Q96RR4	588 aa		29.56	■■■□□ 2.32
NIPA2-209	ENST00000560762	EZH2	Q15910	746 aa	Known RBP	29.54	■■■□□ 2.32
NIPA2-209	ENST00000560762	CFAP53	Q96M91	514 aa		29.54	■■■□□ 2.32
NIPA2-209	ENST00000560762	PLSCR1	O15162	318 aa		29.51	■■■□□ 2.31
NIPA2-209	ENST00000560762	DOT1L	Q8TEK3	1739 aa		29.51	■■■□□ 2.31
NIPA2-209	ENST00000560762	RALBP1	Q15311	655 aa		29.5	■■■□□ 2.31
NIPA2-209	ENST00000560762	HMOX1	P09601	288 aa		29.49	■■■□□ 2.31
NIPA2-209	ENST00000560762	PRIM1	P49642	420 aa	Known RBP	29.49	■■■□□ 2.31
NIPA2-209	ENST00000560762	RGPD3	A6NKT7	1758 aa	Predicted RBP	29.49	■■■□□ 2.31
NIPA2-209	ENST00000560762	RGPD4	Q7Z3J3	1758 aa		29.49	■■■□□ 2.31
NIPA2-209	ENST00000560762	NKX1-1	Q15270	411 aa	Predicted RBP	29.48	■■■□□ 2.31
NIPA2-209	ENST00000560762	PLEKHO1	Q53GL0	409 aa	Predicted RBP	29.48	■■■□□ 2.31
NIPA2-209	ENST00000560762	U2SURP	O15042	1029 aa	Known RBP	29.47	■■■□□ 2.31
NIPA2-209	ENST00000560762	PHKG2	P15735	406 aa		29.47	■■■□□ 2.31
NIPA2-209	ENST00000560762	AMOT	Q4VCS5	1084 aa		29.47	■■■□□ 2.31
NIPA2-209	ENST00000560762	KAT6B	Q8WYB5	2073 aa		29.46	■■■□□ 2.31
NIPA2-209	ENST00000560762	BTAF1	O14981	1849 aa		29.46	■■■□□ 2.31
NIPA2-209	ENST00000560762	IFNL2	Q8IZJ0	200 aa		29.46	■■■□□ 2.31
NIPA2-209	ENST00000560762	RREB1	Q92766	1687 aa		29.46	■■■□□ 2.31
NIPA2-209	ENST00000560762	SYTL4	Q96C24	671 aa	Predicted RBP	29.45	■■■□□ 2.31
NIPA2-209	ENST00000560762	TOGARAM1	Q9Y4F4	1720 aa		29.42	■■■□□ 2.3
NIPA2-209	ENST00000560762	ZNF530	Q6P9A1	599 aa	Predicted RBP	29.42	■■■□□ 2.3
NIPA2-209	ENST00000560762	NUDC	Q9Y266	331 aa		29.42	■■■□□ 2.3
NIPA2-209	ENST00000560762	PROM2	Q8N271	834 aa		29.41	■■■□□ 2.3
NIPA2-209	ENST00000560762	NUP188	Q5SRE5	1749 aa		29.4	■■■□□ 2.3
NIPA2-209	ENST00000560762	MYBBP1A	Q9BQG0	1328 aa	Known RBP	29.39	■■■□□ 2.3
NIPA2-209	ENST00000560762	TXNRD1	Q16881	649 aa		29.38	■■■□□ 2.29
NIPA2-209	ENST00000560762	PRKRIP1	Q9H875	184 aa	Predicted RBP	29.38	■■■□□ 2.29
NIPA2-209	ENST00000560762	HSP90AB1	P08238	724 aa	Known RBP	29.37	■■■□□ 2.29
NIPA2-209	ENST00000560762	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.36	■■■□□ 2.29
NIPA2-209	ENST00000560762	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.36	■■■□□ 2.29
NIPA2-209	ENST00000560762	C1orf141	Q5JVX7	400 aa		29.36	■■■□□ 2.29
NIPA2-209	ENST00000560762	MPRIP	Q6WCQ1	1025 aa		29.35	■■■□□ 2.29
NIPA2-209	ENST00000560762	DCAF5	Q96JK2	942 aa		29.35	■■■□□ 2.29
NIPA2-209	ENST00000560762	RSPH6A	Q9H0K4	717 aa		29.35	■■■□□ 2.29
NIPA2-209	ENST00000560762	ITGB4	P16144	1822 aa		29.34	■■■□□ 2.29
NIPA2-209	ENST00000560762	KDM6A	O15550	1401 aa	Predicted RBP	29.34	■■■□□ 2.29
NIPA2-209	ENST00000560762	MTHFSD	Q2M296	383 aa	Known RBP	29.33	■■■□□ 2.29
NIPA2-209	ENST00000560762	AKAP4	Q5JQC9	854 aa		29.32	■■■□□ 2.28
NIPA2-209	ENST00000560762	PIGB	Q92521	554 aa		29.32	■■■□□ 2.28
NIPA2-209	ENST00000560762	PRKAR2B	P31323	418 aa		29.31	■■■□□ 2.28
NIPA2-209	ENST00000560762	ERVV-2	B6SEH9	535 aa		29.3	■■■□□ 2.28
NIPA2-209	ENST00000560762	FCHSD2	O94868	740 aa		29.3	■■■□□ 2.28
NIPA2-209	ENST00000560762	TMOD3	Q9NYL9	352 aa		29.3	■■■□□ 2.28
NIPA2-209	ENST00000560762	NBPF14	Q5TI25	921 aa		29.29	■■■□□ 2.28
NIPA2-209	ENST00000560762	LRRC4B	Q9NT99	713 aa		29.28	■■■□□ 2.28
NIPA2-209	ENST00000560762	LY75	O60449	1722 aa		29.28	■■■□□ 2.28
NIPA2-209	ENST00000560762	PSD	A5PKW4	1024 aa	Predicted RBP	29.27	■■■□□ 2.28
NIPA2-209	ENST00000560762	R3HDM1	Q15032	1099 aa	Known RBP	29.27	■■■□□ 2.28
NIPA2-209	ENST00000560762	SLC27A3	Q5K4L6	730 aa		29.27	■■■□□ 2.28
NIPA2-209	ENST00000560762	PHACTR3	Q96KR7	559 aa		29.27	■■■□□ 2.28
NIPA2-209	ENST00000560762	ANO8	Q9HCE9	1232 aa	Predicted RBP	29.26	■■■□□ 2.27
NIPA2-209	ENST00000560762	PALLD	Q8WX93	1383 aa		29.26	■■■□□ 2.27
NIPA2-209	ENST00000560762	GAS2L2	Q8NHY3	880 aa		29.25	■■■□□ 2.27
NIPA2-209	ENST00000560762	PAPPA	Q13219	1627 aa		29.24	■■■□□ 2.27
NIPA2-209	ENST00000560762	SMARCC1	Q92922	1105 aa	Predicted RBP	29.24	■■■□□ 2.27
NIPA2-209	ENST00000560762	SCN11A	Q9UI33	1791 aa		29.24	■■■□□ 2.27
NIPA2-209	ENST00000560762	CABP4	P57796	275 aa		29.23	■■■□□ 2.27
NIPA2-209	ENST00000560762	ADAMTS7	Q9UKP4	1686 aa		29.22	■■■□□ 2.27
NIPA2-209	ENST00000560762	LGR6	Q9HBX8	967 aa		29.22	■■■□□ 2.27
NIPA2-209	ENST00000560762	RNMT	O43148	476 aa	Known RBP	29.21	■■■□□ 2.27
NIPA2-209	ENST00000560762	KCNQ4	P56696	695 aa		29.21	■■■□□ 2.27
NIPA2-209	ENST00000560762	CCNL1	Q9UK58	526 aa	Predicted RBP	29.21	■■■□□ 2.27
NIPA2-209	ENST00000560762	ASAP1	Q9ULH1	1129 aa		29.21	■■■□□ 2.27
NIPA2-209	ENST00000560762	MAP3K5	Q99683	1374 aa		29.21	■■■□□ 2.27
NIPA2-209	ENST00000560762	MRC1	P22897	1456 aa		29.19	■■■□□ 2.26
NIPA2-209	ENST00000560762	ATG3	Q9NT62	314 aa		29.19	■■■□□ 2.26
NIPA2-209	ENST00000560762	GNAT3	A8MTJ3	354 aa		29.18	■■■□□ 2.26
NIPA2-209	ENST00000560762	NFATC2IP	Q8NCF5	419 aa		29.18	■■■□□ 2.26
NIPA2-209	ENST00000560762	PLEKHF1	Q96S99	279 aa		29.18	■■■□□ 2.26
NIPA2-209	ENST00000560762	STK32B	Q9NY57	414 aa		29.18	■■■□□ 2.26
NIPA2-209	ENST00000560762	SLC15A2	Q16348	729 aa		29.17	■■■□□ 2.26
NIPA2-209	ENST00000560762	SLC52A2	Q9HAB3	445 aa		29.17	■■■□□ 2.26
NIPA2-209	ENST00000560762	ZNF827	Q17R98	1081 aa		29.14	■■■□□ 2.26
NIPA2-209	ENST00000560762	IL17RE	Q8NFR9	667 aa		29.14	■■■□□ 2.26
NIPA2-209	ENST00000560762	AKT1S1	Q96B36	256 aa		29.14	■■■□□ 2.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms