RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
IVD-212ENST00000560660 NME9Q86XW9 330 aa17.01■□□□□ 0.31
IVD-212ENST00000560660 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
IVD-212ENST00000560660 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
IVD-212ENST00000560660 CAPN15O75808 1086 aa16.99■□□□□ 0.31
IVD-212ENST00000560660 NSD2O96028 1365 aa16.99■□□□□ 0.31
IVD-212ENST00000560660 USP31Q70CQ4 1352 aa16.99■□□□□ 0.31
IVD-212ENST00000560660 LY75O60449 1722 aa16.97■□□□□ 0.31
IVD-212ENST00000560660 LTN1O94822 1766 aa16.97■□□□□ 0.31
IVD-212ENST00000560660 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
IVD-212ENST00000560660 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.31
IVD-212ENST00000560660 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
IVD-212ENST00000560660 USP47Q96K76 1375 aa16.96■□□□□ 0.31
IVD-212ENST00000560660 TOMM70O94826 608 aa16.95■□□□□ 0.3
IVD-212ENST00000560660 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
IVD-212ENST00000560660 IP6K1Q92551 441 aa16.95■□□□□ 0.3
IVD-212ENST00000560660 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
IVD-212ENST00000560660 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
IVD-212ENST00000560660 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
IVD-212ENST00000560660 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
IVD-212ENST00000560660 HTRA3P83110 453 aa16.9■□□□□ 0.3
IVD-212ENST00000560660 PHF14O94880 888 aa16.89■□□□□ 0.29
IVD-212ENST00000560660 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
IVD-212ENST00000560660 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
IVD-212ENST00000560660 MON2Q7Z3U7 1717 aa16.89■□□□□ 0.29
IVD-212ENST00000560660 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
IVD-212ENST00000560660 TNS4Q8IZW8 715 aa16.88■□□□□ 0.29
IVD-212ENST00000560660 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
IVD-212ENST00000560660 AK7Q96M32 723 aa16.88■□□□□ 0.29
IVD-212ENST00000560660 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
IVD-212ENST00000560660 FBLN1P23142 703 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 SLC12A5Q9H2X9 1139 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 C5P01031 1676 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
IVD-212ENST00000560660 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
IVD-212ENST00000560660 AMPHP49418 695 aa16.86■□□□□ 0.29
IVD-212ENST00000560660 MEGF6O75095 1541 aa16.86■□□□□ 0.29
IVD-212ENST00000560660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
IVD-212ENST00000560660 HOXC9P31274 260 aa16.85■□□□□ 0.29
IVD-212ENST00000560660 PRELPP51888 382 aa16.85■□□□□ 0.29
IVD-212ENST00000560660 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
IVD-212ENST00000560660 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
IVD-212ENST00000560660 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
IVD-212ENST00000560660 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
IVD-212ENST00000560660 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
IVD-212ENST00000560660 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
IVD-212ENST00000560660 PCNTO95613 3336 aa16.83■□□□□ 0.28
IVD-212ENST00000560660 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
IVD-212ENST00000560660 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
IVD-212ENST00000560660 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
IVD-212ENST00000560660 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
IVD-212ENST00000560660 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
IVD-212ENST00000560660 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
IVD-212ENST00000560660 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
IVD-212ENST00000560660 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
IVD-212ENST00000560660 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
IVD-212ENST00000560660 RGPD2P0DJD1 1756 aa16.82■□□□□ 0.28
IVD-212ENST00000560660 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
IVD-212ENST00000560660 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
IVD-212ENST00000560660 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
IVD-212ENST00000560660 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
IVD-212ENST00000560660 C4BP0C0L5 1744 aa16.8■□□□□ 0.28
IVD-212ENST00000560660 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
IVD-212ENST00000560660 COG3Q96JB2 828 aa16.8■□□□□ 0.28
IVD-212ENST00000560660 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
IVD-212ENST00000560660 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
IVD-212ENST00000560660 SSFA2P28290 1259 aa16.79■□□□□ 0.28
IVD-212ENST00000560660 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
IVD-212ENST00000560660 MMP10P09238 476 aa16.78■□□□□ 0.28
IVD-212ENST00000560660 TGFB2P61812 414 aa16.78■□□□□ 0.28
IVD-212ENST00000560660 FSTL1Q12841 308 aa16.78■□□□□ 0.28
IVD-212ENST00000560660 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
IVD-212ENST00000560660 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
IVD-212ENST00000560660 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
IVD-212ENST00000560660 KCNA4P22459 653 aa16.77■□□□□ 0.28
IVD-212ENST00000560660 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 FCHSD2O94868 740 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
IVD-212ENST00000560660 C9orf131Q5VYM1 1079 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 PIGBQ92521 554 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
IVD-212ENST00000560660 GNPATO15228 680 aa16.75■□□□□ 0.27
IVD-212ENST00000560660 CYP27B1O15528 508 aa16.75■□□□□ 0.27
IVD-212ENST00000560660 DPEP1P16444 411 aa16.75■□□□□ 0.27
IVD-212ENST00000560660 RRAGCQ9HB90 399 aa16.75■□□□□ 0.27
IVD-212ENST00000560660 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
IVD-212ENST00000560660 SIK1P57059 783 aa16.74■□□□□ 0.27
IVD-212ENST00000560660 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
IVD-212ENST00000560660 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
IVD-212ENST00000560660 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
IVD-212ENST00000560660 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
IVD-212ENST00000560660 ITPK1Q13572 414 aa16.72■□□□□ 0.27
IVD-212ENST00000560660 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
IVD-212ENST00000560660 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
IVD-212ENST00000560660 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms