RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
SNX22-204ENST00000560607 COL18A1P39060 1754 aa22.79■■□□□ 1.24
SNX22-204ENST00000560607 PUS7Q96PZ0 661 aaKnown RBP22.79■■□□□ 1.24
SNX22-204ENST00000560607 SLIT3O75094 1523 aa22.77■■□□□ 1.24
SNX22-204ENST00000560607 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
SNX22-204ENST00000560607 PPIP5K1Q6PFW1 1433 aa22.76■■□□□ 1.23
SNX22-204ENST00000560607 KCNQ4P56696 695 aa22.76■■□□□ 1.23
SNX22-204ENST00000560607 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
SNX22-204ENST00000560607 HTRA3P83110 453 aa22.75■■□□□ 1.23
SNX22-204ENST00000560607 MSL1Q68DK7 614 aa22.75■■□□□ 1.23
SNX22-204ENST00000560607 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
SNX22-204ENST00000560607 WWC3Q9ULE0 1092 aa22.75■■□□□ 1.23
SNX22-204ENST00000560607 ABCC6O95255 1503 aa22.73■■□□□ 1.23
SNX22-204ENST00000560607 MON2Q7Z3U7 1717 aa22.73■■□□□ 1.23
SNX22-204ENST00000560607 KAT6BQ8WYB5 2073 aa22.72■■□□□ 1.23
SNX22-204ENST00000560607 WDR90Q96KV7 1748 aa22.72■■□□□ 1.23
SNX22-204ENST00000560607 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
SNX22-204ENST00000560607 TUBGCP6Q96RT7 1819 aa22.71■■□□□ 1.23
SNX22-204ENST00000560607 CABP1Q9NZU7 370 aa22.7■■□□□ 1.22
SNX22-204ENST00000560607 SOX12O15370 315 aa22.69■■□□□ 1.22
SNX22-204ENST00000560607 KCNH5Q8NCM2 988 aa22.69■■□□□ 1.22
SNX22-204ENST00000560607 IL2RBP14784 551 aa22.68■■□□□ 1.22
SNX22-204ENST00000560607 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
SNX22-204ENST00000560607 PCDH10Q9P2E7 1040 aa22.68■■□□□ 1.22
SNX22-204ENST00000560607 PCNTO95613 3336 aa22.67■■□□□ 1.22
SNX22-204ENST00000560607 IGSF1Q8N6C5 1336 aa22.67■■□□□ 1.22
SNX22-204ENST00000560607 KIF20BQ96Q89 1820 aa22.67■■□□□ 1.22
SNX22-204ENST00000560607 RBM46Q8TBY0 533 aaKnown RBP22.67■■□□□ 1.22
SNX22-204ENST00000560607 RGPD5Q99666 1765 aa22.67■■□□□ 1.22
SNX22-204ENST00000560607 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
SNX22-204ENST00000560607 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
SNX22-204ENST00000560607 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
SNX22-204ENST00000560607 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
SNX22-204ENST00000560607 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
SNX22-204ENST00000560607 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
SNX22-204ENST00000560607 SYTL4Q96C24 671 aaPredicted RBP22.64■■□□□ 1.21
SNX22-204ENST00000560607 CD163L1Q9NR16 1453 aa22.63■■□□□ 1.21
SNX22-204ENST00000560607 C16orf71Q8IYS4 520 aaPredicted RBP22.63■■□□□ 1.21
SNX22-204ENST00000560607 CCNL1Q9UK58 526 aaPredicted RBP22.63■■□□□ 1.21
SNX22-204ENST00000560607 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
SNX22-204ENST00000560607 PANK3Q9H999 370 aa22.62■■□□□ 1.21
SNX22-204ENST00000560607 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
SNX22-204ENST00000560607 FSTL1Q12841 308 aa22.61■■□□□ 1.21
SNX22-204ENST00000560607 DDX54Q8TDD1 881 aaKnown RBP22.6■■□□□ 1.21
SNX22-204ENST00000560607 HSPA1AP0DMV8 641 aaKnown RBP22.59■■□□□ 1.21
SNX22-204ENST00000560607 HSPA1BP0DMV9 641 aaKnown RBP22.59■■□□□ 1.21
SNX22-204ENST00000560607 PRIM1P49642 420 aaKnown RBP22.59■■□□□ 1.21
SNX22-204ENST00000560607 ANKRD26Q9UPS8 1709 aa22.59■■□□□ 1.21
SNX22-204ENST00000560607 PIK3C2AO00443 1686 aa22.58■■□□□ 1.21
SNX22-204ENST00000560607 ZNF692Q9BU19 519 aaPredicted RBP22.58■■□□□ 1.21
SNX22-204ENST00000560607 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
SNX22-204ENST00000560607 ERBB3P21860 1342 aa22.57■■□□□ 1.2
SNX22-204ENST00000560607 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
SNX22-204ENST00000560607 EDC4Q6P2E9 1401 aaKnown RBP22.55■■□□□ 1.2
SNX22-204ENST00000560607 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
SNX22-204ENST00000560607 LY75O60449 1722 aa22.53■■□□□ 1.2
SNX22-204ENST00000560607 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
SNX22-204ENST00000560607 CARD14Q9BXL6 1004 aa22.52■■□□□ 1.2
SNX22-204ENST00000560607 CICQ96RK0 1608 aaPredicted RBP22.52■■□□□ 1.2
SNX22-204ENST00000560607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNX22-204ENST00000560607 NFAT5O94916 1531 aa22.5■■□□□ 1.19
SNX22-204ENST00000560607 NSD2O96028 1365 aa22.5■■□□□ 1.19
SNX22-204ENST00000560607 HMGB2P26583 209 aaKnown RBP22.48■■□□□ 1.19
SNX22-204ENST00000560607 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
SNX22-204ENST00000560607 ANKRD24Q8TF21 1146 aa22.48■■□□□ 1.19
SNX22-204ENST00000560607 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
SNX22-204ENST00000560607 USP54Q70EL1 1684 aa22.48■■□□□ 1.19
SNX22-204ENST00000560607 TTC21AQ8NDW8 1320 aa22.47■■□□□ 1.19
SNX22-204ENST00000560607 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
SNX22-204ENST00000560607 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
SNX22-204ENST00000560607 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
SNX22-204ENST00000560607 SMC1BQ8NDV3 1235 aa22.44■■□□□ 1.18
SNX22-204ENST00000560607 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
SNX22-204ENST00000560607 KDM2BQ8NHM5 1336 aa22.43■■□□□ 1.18
SNX22-204ENST00000560607 NME9Q86XW9 330 aa22.43■■□□□ 1.18
SNX22-204ENST00000560607 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
SNX22-204ENST00000560607 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
SNX22-204ENST00000560607 C9orf131Q5VYM1 1079 aa22.41■■□□□ 1.18
SNX22-204ENST00000560607 RRAGCQ9HB90 399 aa22.41■■□□□ 1.18
SNX22-204ENST00000560607 DOT1LQ8TEK3 1739 aa22.4■■□□□ 1.18
SNX22-204ENST00000560607 PLEKHG2Q9H7P9 1386 aa22.4■■□□□ 1.18
SNX22-204ENST00000560607 AMER1Q5JTC6 1135 aaPredicted RBP22.4■■□□□ 1.18
SNX22-204ENST00000560607 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
SNX22-204ENST00000560607 FYB1O15117 783 aa22.39■■□□□ 1.17
SNX22-204ENST00000560607 PHF14O94880 888 aa22.39■■□□□ 1.17
SNX22-204ENST00000560607 AK7Q96M32 723 aa22.39■■□□□ 1.17
SNX22-204ENST00000560607 LTN1O94822 1766 aa22.39■■□□□ 1.17
SNX22-204ENST00000560607 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
SNX22-204ENST00000560607 COG3Q96JB2 828 aa22.38■■□□□ 1.17
SNX22-204ENST00000560607 C5P01031 1676 aa22.38■■□□□ 1.17
SNX22-204ENST00000560607 TGFB2P61812 414 aa22.37■■□□□ 1.17
SNX22-204ENST00000560607 FAM161AQ3B820 660 aa22.37■■□□□ 1.17
SNX22-204ENST00000560607 KCPQ6ZWJ8 1503 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 PXDNLA1KZ92 1463 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.36■■□□□ 1.17
SNX22-204ENST00000560607 SMIM5Q71RC9 77 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 MORC1Q86VD1 984 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 AMIGO3Q86WK7 504 aa22.36■■□□□ 1.17
SNX22-204ENST00000560607 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
SNX22-204ENST00000560607 C10orf71Q711Q0 1435 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms