RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
ACTC1-203ENST00000560563 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
ACTC1-203ENST00000560563 NME9Q86XW9 330 aa11.31□□□□□ -0.6
ACTC1-203ENST00000560563 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
ACTC1-203ENST00000560563 PXDNQ92626 1479 aa11.31□□□□□ -0.6
ACTC1-203ENST00000560563 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
ACTC1-203ENST00000560563 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
ACTC1-203ENST00000560563 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
ACTC1-203ENST00000560563 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
ACTC1-203ENST00000560563 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
ACTC1-203ENST00000560563 GGNBP2Q9H3C7 697 aa11.3□□□□□ -0.6
ACTC1-203ENST00000560563 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
ACTC1-203ENST00000560563 SLC34A2O95436 690 aa11.29□□□□□ -0.6
ACTC1-203ENST00000560563 RALBP1Q15311 655 aa11.29□□□□□ -0.6
ACTC1-203ENST00000560563 ABTB2Q8N961 1025 aa11.29□□□□□ -0.6
ACTC1-203ENST00000560563 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
ACTC1-203ENST00000560563 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
ACTC1-203ENST00000560563 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
ACTC1-203ENST00000560563 DSG2Q14126 1118 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 COG3Q96JB2 828 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
ACTC1-203ENST00000560563 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
ACTC1-203ENST00000560563 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.6
ACTC1-203ENST00000560563 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.6
ACTC1-203ENST00000560563 FOXK1P85037 733 aa11.27□□□□□ -0.61
ACTC1-203ENST00000560563 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
ACTC1-203ENST00000560563 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
ACTC1-203ENST00000560563 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
ACTC1-203ENST00000560563 ARHGEF10O15013 1369 aa11.25□□□□□ -0.61
ACTC1-203ENST00000560563 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
ACTC1-203ENST00000560563 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
ACTC1-203ENST00000560563 PPP2R1AP30153 589 aa11.24□□□□□ -0.61
ACTC1-203ENST00000560563 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
ACTC1-203ENST00000560563 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
ACTC1-203ENST00000560563 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
ACTC1-203ENST00000560563 USP19O94966 1318 aa11.23□□□□□ -0.61
ACTC1-203ENST00000560563 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
ACTC1-203ENST00000560563 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
ACTC1-203ENST00000560563 FBLN1P23142 703 aa11.22□□□□□ -0.61
ACTC1-203ENST00000560563 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
ACTC1-203ENST00000560563 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
ACTC1-203ENST00000560563 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.61
ACTC1-203ENST00000560563 SLIT3O75094 1523 aa11.21□□□□□ -0.61
ACTC1-203ENST00000560563 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
ACTC1-203ENST00000560563 GCP02774 474 aa11.21□□□□□ -0.61
ACTC1-203ENST00000560563 KCNH5Q8NCM2 988 aa11.21□□□□□ -0.61
ACTC1-203ENST00000560563 AXIN2Q9Y2T1 843 aa11.21□□□□□ -0.61
ACTC1-203ENST00000560563 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
ACTC1-203ENST00000560563 MTHFSP49914 203 aa11.2□□□□□ -0.62
ACTC1-203ENST00000560563 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
ACTC1-203ENST00000560563 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
ACTC1-203ENST00000560563 POLKQ9UBT6 870 aa11.2□□□□□ -0.62
ACTC1-203ENST00000560563 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
ACTC1-203ENST00000560563 HSPA1LP34931 641 aa11.19□□□□□ -0.62
ACTC1-203ENST00000560563 RRS1Q15050 365 aaKnown RBP11.19□□□□□ -0.62
ACTC1-203ENST00000560563 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
ACTC1-203ENST00000560563 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
ACTC1-203ENST00000560563 EMILIN1Q9Y6C2 1016 aa11.18□□□□□ -0.62
ACTC1-203ENST00000560563 NFAT5O94916 1531 aa11.18□□□□□ -0.62
ACTC1-203ENST00000560563 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
ACTC1-203ENST00000560563 JCADQ9P266 1359 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 TBC1D12O60347 775 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
ACTC1-203ENST00000560563 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
ACTC1-203ENST00000560563 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
ACTC1-203ENST00000560563 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
ACTC1-203ENST00000560563 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
ACTC1-203ENST00000560563 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
ACTC1-203ENST00000560563 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
ACTC1-203ENST00000560563 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
ACTC1-203ENST00000560563 ZC3H6P61129 1189 aaKnown RBP11.16□□□□□ -0.62
ACTC1-203ENST00000560563 FBXO41Q8TF61 875 aa11.16□□□□□ -0.62
ACTC1-203ENST00000560563 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
ACTC1-203ENST00000560563 INSRP06213 1382 aa11.16□□□□□ -0.62
ACTC1-203ENST00000560563 AMPHP49418 695 aa11.15□□□□□ -0.62
ACTC1-203ENST00000560563 PPP1R15BQ5SWA1 713 aa11.15□□□□□ -0.62
ACTC1-203ENST00000560563 CFAP53Q96M91 514 aa11.15□□□□□ -0.62
ACTC1-203ENST00000560563 CPDO75976 1380 aa11.15□□□□□ -0.63
ACTC1-203ENST00000560563 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
ACTC1-203ENST00000560563 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 PDE4AP27815 886 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 HOXC9P31274 260 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 HSP90AB2PQ58FF8 381 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 IP6K1Q92551 441 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 FLT4P35916 1363 aa11.14□□□□□ -0.63
ACTC1-203ENST00000560563 KIAA0232Q92628 1395 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms