RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
APH1B-207ENST00000559971 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
APH1B-207ENST00000559971 PEAK1Q9H792 1746 aa20.34■□□□□ 0.85
APH1B-207ENST00000559971 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
APH1B-207ENST00000559971 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.84
APH1B-207ENST00000559971 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
APH1B-207ENST00000559971 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
APH1B-207ENST00000559971 SNX21Q969T3 373 aa20.32■□□□□ 0.84
APH1B-207ENST00000559971 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
APH1B-207ENST00000559971 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
APH1B-207ENST00000559971 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
APH1B-207ENST00000559971 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
APH1B-207ENST00000559971 HMMRO75330 724 aa20.3■□□□□ 0.84
APH1B-207ENST00000559971 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
APH1B-207ENST00000559971 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
APH1B-207ENST00000559971 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
APH1B-207ENST00000559971 NLRP6P59044 892 aa20.29■□□□□ 0.84
APH1B-207ENST00000559971 ANTXR1Q9H6X2 564 aa20.29■□□□□ 0.84
APH1B-207ENST00000559971 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
APH1B-207ENST00000559971 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
APH1B-207ENST00000559971 MCM10Q7L590 875 aa20.28■□□□□ 0.84
APH1B-207ENST00000559971 ANKLE2Q86XL3 938 aa20.28■□□□□ 0.84
APH1B-207ENST00000559971 CHMP5Q9NZZ3 219 aa20.28■□□□□ 0.84
APH1B-207ENST00000559971 CDC45O75419 566 aa20.27■□□□□ 0.84
APH1B-207ENST00000559971 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.84
APH1B-207ENST00000559971 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
APH1B-207ENST00000559971 EYA1Q99502 592 aa20.27■□□□□ 0.84
APH1B-207ENST00000559971 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
APH1B-207ENST00000559971 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
APH1B-207ENST00000559971 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
APH1B-207ENST00000559971 CIZ1Q9ULV3 898 aaPredicted RBP20.25■□□□□ 0.83
APH1B-207ENST00000559971 RGS12O14924 1447 aa20.25■□□□□ 0.83
APH1B-207ENST00000559971 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
APH1B-207ENST00000559971 KCNA6P17658 529 aa20.24■□□□□ 0.83
APH1B-207ENST00000559971 HOXC9P31274 260 aa20.24■□□□□ 0.83
APH1B-207ENST00000559971 CCDC30Q5VVM6 783 aa20.24■□□□□ 0.83
APH1B-207ENST00000559971 CASC1Q6TDU7 716 aa20.24■□□□□ 0.83
APH1B-207ENST00000559971 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
APH1B-207ENST00000559971 PTMSP20962 102 aa20.23■□□□□ 0.83
APH1B-207ENST00000559971 C1orf115Q9H7X2 142 aa20.23■□□□□ 0.83
APH1B-207ENST00000559971 SETD1BQ9UPS6 1966 aaKnown RBP20.22■□□□□ 0.83
APH1B-207ENST00000559971 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
APH1B-207ENST00000559971 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
APH1B-207ENST00000559971 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
APH1B-207ENST00000559971 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
APH1B-207ENST00000559971 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
APH1B-207ENST00000559971 GNAI3P08754 354 aa20.21■□□□□ 0.83
APH1B-207ENST00000559971 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
APH1B-207ENST00000559971 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
APH1B-207ENST00000559971 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
APH1B-207ENST00000559971 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
APH1B-207ENST00000559971 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
APH1B-207ENST00000559971 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
APH1B-207ENST00000559971 TBC1D9Q6ZT07 1266 aa20.19■□□□□ 0.82
APH1B-207ENST00000559971 SOX12O15370 315 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 TTC22Q5TAA0 569 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 IP6K1Q92551 441 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
APH1B-207ENST00000559971 GNAI2P04899 355 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 HOXB7P09629 217 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 IL27Q8NEV9 243 aa20.18■□□□□ 0.82
APH1B-207ENST00000559971 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
APH1B-207ENST00000559971 PXDNLA1KZ92 1463 aa20.17■□□□□ 0.82
APH1B-207ENST00000559971 MSH6P52701 1360 aa20.17■□□□□ 0.82
APH1B-207ENST00000559971 CHD2O14647 1828 aaKnown RBP20.16■□□□□ 0.82
APH1B-207ENST00000559971 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
APH1B-207ENST00000559971 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
APH1B-207ENST00000559971 DDX11L8A8MPP1 907 aa20.15■□□□□ 0.82
APH1B-207ENST00000559971 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
APH1B-207ENST00000559971 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
APH1B-207ENST00000559971 KRT24Q2M2I5 525 aa20.14■□□□□ 0.81
APH1B-207ENST00000559971 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
APH1B-207ENST00000559971 NWD1Q149M9 1564 aa20.14■□□□□ 0.81
APH1B-207ENST00000559971 FOXO3O43524 673 aa20.13■□□□□ 0.81
APH1B-207ENST00000559971 RABEP1Q15276 862 aa20.13■□□□□ 0.81
APH1B-207ENST00000559971 MCM4P33991 863 aa20.12■□□□□ 0.81
APH1B-207ENST00000559971 MEIS3Q99687 375 aa20.12■□□□□ 0.81
APH1B-207ENST00000559971 KDM4FA0A1W2PPD8 638 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 REC8O95072 547 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 FLIIQ13045 1269 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 PHRF1Q9P1Y6 1649 aaKnown RBP20.11■□□□□ 0.81
APH1B-207ENST00000559971 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
APH1B-207ENST00000559971 PSME1Q06323 249 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 AMOTQ4VCS5 1084 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
APH1B-207ENST00000559971 K7ELQ4 463 aaPredicted RBP20.1■□□□□ 0.81
APH1B-207ENST00000559971 CEMIPQ8WUJ3 1361 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 OVOS2A0A0G2JMS6 1433 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 GSPT1P15170 499 aaKnown RBP20.09■□□□□ 0.81
APH1B-207ENST00000559971 DDIT3P35638 169 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 SLC4A10Q6U841 1118 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 GBP4Q96PP9 640 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 ISY1Q9ULR0 285 aaKnown RBP20.09■□□□□ 0.81
APH1B-207ENST00000559971 HDAC5Q9UQL6 1122 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
APH1B-207ENST00000559971 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.81
APH1B-207ENST00000559971 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.81
APH1B-207ENST00000559971 MIS18AQ9NYP9 233 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms