RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NFAT5O94916 1531 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 PTPRCP08575 1304 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 KCNA6P17658 529 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 NUCB1Q02818 461 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 SOS1Q07889 1333 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-212ENST00000559937 BECN1Q14457 450 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 AEBP1Q8IUX7 1158 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 C8orf58Q8NAV2 365 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 GAS2L2Q8NHY3 880 aa10.2□□□□□ -0.78
SMAD3-212ENST00000559937 ZNF335Q9H4Z2 1342 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-212ENST00000559937 LMO7Q8WWI1 1683 aa10.19□□□□□ -0.78
SMAD3-212ENST00000559937 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
SMAD3-212ENST00000559937 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
SMAD3-212ENST00000559937 TBC1D32Q96NH3 1257 aa10.19□□□□□ -0.78
SMAD3-212ENST00000559937 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
SMAD3-212ENST00000559937 RGS12O14924 1447 aa10.18□□□□□ -0.78
SMAD3-212ENST00000559937 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
SMAD3-212ENST00000559937 AMPHP49418 695 aa10.18□□□□□ -0.78
SMAD3-212ENST00000559937 BABAM1Q9NWV8 329 aa10.18□□□□□ -0.78
SMAD3-212ENST00000559937 TRPM3Q9HCF6 1732 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-212ENST00000559937 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-212ENST00000559937 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
SMAD3-212ENST00000559937 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
SMAD3-212ENST00000559937 NBR1Q14596 966 aa10.17□□□□□ -0.78
SMAD3-212ENST00000559937 CHD1LQ86WJ1 897 aa10.17□□□□□ -0.78
SMAD3-212ENST00000559937 EYA1Q99502 592 aa10.17□□□□□ -0.78
SMAD3-212ENST00000559937 SLIT3O75094 1523 aa10.17□□□□□ -0.78
SMAD3-212ENST00000559937 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-212ENST00000559937 SEC24BO95487 1268 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 HOXC9P31274 260 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 NLRP6P59044 892 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 DCTN1Q14203 1278 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 RTF1Q92541 710 aaKnown RBP10.16□□□□□ -0.78
SMAD3-212ENST00000559937 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 RGPD2P0DJD1 1756 aa10.16□□□□□ -0.78
SMAD3-212ENST00000559937 BMP2KLQ5H9B9 411 aa10.15□□□□□ -0.78
SMAD3-212ENST00000559937 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.78
SMAD3-212ENST00000559937 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
SMAD3-212ENST00000559937 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-212ENST00000559937 MTHFSDQ2M296 383 aaKnown RBP10.14□□□□□ -0.79
SMAD3-212ENST00000559937 MCM10Q7L590 875 aa10.14□□□□□ -0.79
SMAD3-212ENST00000559937 RPAP2Q8IXW5 612 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-212ENST00000559937 MST1RQ04912 1400 aa10.14□□□□□ -0.79
SMAD3-212ENST00000559937 NCAPD2Q15021 1401 aa10.14□□□□□ -0.79
SMAD3-212ENST00000559937 ATP10DQ9P241 1426 aa10.14□□□□□ -0.79
SMAD3-212ENST00000559937 ALS2Q96Q42 1657 aa10.13□□□□□ -0.79
SMAD3-212ENST00000559937 GNAT3A8MTJ3 354 aa10.13□□□□□ -0.79
SMAD3-212ENST00000559937 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
SMAD3-212ENST00000559937 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
SMAD3-212ENST00000559937 ABTB2Q8N961 1025 aa10.13□□□□□ -0.79
SMAD3-212ENST00000559937 MSH6P52701 1360 aa10.13□□□□□ -0.79
SMAD3-212ENST00000559937 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 SIPA1L3O60292 1781 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-212ENST00000559937 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 KCNH5Q8NCM2 988 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 IP6K1Q92551 441 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 DCTPP1Q9H773 170 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 TSPYL4Q9UJ04 414 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 OVOS2A0A0G2JMS6 1433 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
SMAD3-212ENST00000559937 SOX12O15370 315 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 CCT4P50991 539 aaKnown RBP10.11□□□□□ -0.79
SMAD3-212ENST00000559937 NFKBIBQ15653 356 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 ANKRD45Q5TZF3 282 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 SIRT2Q8IXJ6 389 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 C22orf23Q9BZE7 217 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 ABCC6O95255 1503 aa10.11□□□□□ -0.79
SMAD3-212ENST00000559937 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
SMAD3-212ENST00000559937 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
SMAD3-212ENST00000559937 CEMIPQ8WUJ3 1361 aa10.1□□□□□ -0.79
SMAD3-212ENST00000559937 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
SMAD3-212ENST00000559937 RGPD5Q99666 1765 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 FOXO3O43524 673 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 HMMRO75330 724 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 HOXB7P09629 217 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 CCDC30Q5VVM6 783 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 STK31Q9BXU1 1019 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
SMAD3-212ENST00000559937 DCCP43146 1447 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
SMAD3-212ENST00000559937 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-212ENST00000559937 KRT24Q2M2I5 525 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 CEP85Q6P2H3 762 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
SMAD3-212ENST00000559937 SCN11AQ9UI33 1791 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 TOM1O60784 492 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 CDC45O75419 566 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 PSME1Q06323 249 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 SNX21Q969T3 373 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 ANTXR1Q9H6X2 564 aa10.07□□□□□ -0.8
SMAD3-212ENST00000559937 AK9Q5TCS8 1911 aa10.06□□□□□ -0.8
SMAD3-212ENST00000559937 GNAI3P08754 354 aa10.06□□□□□ -0.8
SMAD3-212ENST00000559937 NUTM2GQ5VZR2 741 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms