RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
TM2D3-208ENST00000559891 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
TM2D3-208ENST00000559891 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
TM2D3-208ENST00000559891 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
TM2D3-208ENST00000559891 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
TM2D3-208ENST00000559891 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
TM2D3-208ENST00000559891 VPS72Q15906 364 aa15.26■□□□□ 0.03
TM2D3-208ENST00000559891 RIPK4P57078 832 aa15.26■□□□□ 0.03
TM2D3-208ENST00000559891 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
TM2D3-208ENST00000559891 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
TM2D3-208ENST00000559891 IL2RBP14784 551 aa15.25■□□□□ 0.03
TM2D3-208ENST00000559891 QTRT2Q9H974 415 aaKnown RBP15.25■□□□□ 0.03
TM2D3-208ENST00000559891 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
TM2D3-208ENST00000559891 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
TM2D3-208ENST00000559891 KCNA4P22459 653 aa15.24■□□□□ 0.03
TM2D3-208ENST00000559891 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
TM2D3-208ENST00000559891 GLI3P10071 1580 aa15.24■□□□□ 0.03
TM2D3-208ENST00000559891 DISP2A7MBM2 1401 aa15.24■□□□□ 0.03
TM2D3-208ENST00000559891 MCM10Q7L590 875 aa15.23■□□□□ 0.03
TM2D3-208ENST00000559891 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.23■□□□□ 0.03
TM2D3-208ENST00000559891 CYP27B1O15528 508 aa15.23■□□□□ 0.03
TM2D3-208ENST00000559891 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
TM2D3-208ENST00000559891 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
TM2D3-208ENST00000559891 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
TM2D3-208ENST00000559891 OVOS2A0A0G2JMS6 1433 aa15.22■□□□□ 0.03
TM2D3-208ENST00000559891 ATRNO75882 1429 aa15.22■□□□□ 0.03
TM2D3-208ENST00000559891 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
TM2D3-208ENST00000559891 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
TM2D3-208ENST00000559891 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
TM2D3-208ENST00000559891 NEFMP07197 916 aa15.22■□□□□ 0.03
TM2D3-208ENST00000559891 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
TM2D3-208ENST00000559891 WWC1Q8IX03 1113 aa15.22■□□□□ 0.03
TM2D3-208ENST00000559891 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
TM2D3-208ENST00000559891 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
TM2D3-208ENST00000559891 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
TM2D3-208ENST00000559891 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
TM2D3-208ENST00000559891 SHANK3Q9BYB0 1731 aa15.21■□□□□ 0.02
TM2D3-208ENST00000559891 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
TM2D3-208ENST00000559891 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
TM2D3-208ENST00000559891 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
TM2D3-208ENST00000559891 IL17REQ8NFR9 667 aa15.2■□□□□ 0.02
TM2D3-208ENST00000559891 A0A0G2JS52 829 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 FAM182BQ5T319 152 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
TM2D3-208ENST00000559891 PKD1L3Q7Z443 1732 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
TM2D3-208ENST00000559891 EP400Q96L91 3159 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 PHKG2P15735 406 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
TM2D3-208ENST00000559891 THRAP3Q9Y2W1 955 aaKnown RBP15.19■□□□□ 0.02
TM2D3-208ENST00000559891 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
TM2D3-208ENST00000559891 GNAT3A8MTJ3 354 aa15.17■□□□□ 0.02
TM2D3-208ENST00000559891 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
TM2D3-208ENST00000559891 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
TM2D3-208ENST00000559891 MAP3K5Q99683 1374 aa15.17■□□□□ 0.02
TM2D3-208ENST00000559891 EXOC5O00471 708 aa15.16■□□□□ 0.02
TM2D3-208ENST00000559891 DDB1Q16531 1140 aa15.16■□□□□ 0.02
TM2D3-208ENST00000559891 AKAP4Q5JQC9 854 aa15.16■□□□□ 0.02
TM2D3-208ENST00000559891 ZNF772Q68DY9 489 aaPredicted RBP15.16■□□□□ 0.02
TM2D3-208ENST00000559891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
TM2D3-208ENST00000559891 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
TM2D3-208ENST00000559891 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
TM2D3-208ENST00000559891 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
TM2D3-208ENST00000559891 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
TM2D3-208ENST00000559891 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
TM2D3-208ENST00000559891 SEPT12Q8IYM1 358 aa15.15■□□□□ 0.02
TM2D3-208ENST00000559891 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
TM2D3-208ENST00000559891 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
TM2D3-208ENST00000559891 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
TM2D3-208ENST00000559891 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
TM2D3-208ENST00000559891 THSD7AQ9UPZ6 1657 aa15.14■□□□□ 0.01
TM2D3-208ENST00000559891 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
TM2D3-208ENST00000559891 ONECUT3O60422 494 aaPredicted RBP15.14■□□□□ 0.01
TM2D3-208ENST00000559891 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.01
TM2D3-208ENST00000559891 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
TM2D3-208ENST00000559891 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
TM2D3-208ENST00000559891 ERICH6BQ5W0A0 696 aa15.13■□□□□ 0.01
TM2D3-208ENST00000559891 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
TM2D3-208ENST00000559891 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
TM2D3-208ENST00000559891 RBM6P78332 1123 aaKnown RBP15.12■□□□□ 0.01
TM2D3-208ENST00000559891 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
TM2D3-208ENST00000559891 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
TM2D3-208ENST00000559891 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
TM2D3-208ENST00000559891 RXRBP28702 533 aa15.11■□□□□ 0.01
TM2D3-208ENST00000559891 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
TM2D3-208ENST00000559891 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
TM2D3-208ENST00000559891 BRWD3Q6RI45 1802 aa15.11■□□□□ 0.01
TM2D3-208ENST00000559891 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 KCNQ3O43525 872 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
TM2D3-208ENST00000559891 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 WDR63Q8IWG1 891 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
TM2D3-208ENST00000559891 SCN11AQ9UI33 1791 aa15.09■□□□□ 0.01
TM2D3-208ENST00000559891 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
TM2D3-208ENST00000559891 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms