RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 EDC4Q6P2E9 1401 aaKnown RBP23.29■■□□□ 1.32
PSEN1-224ENST00000559361 IP6K1Q92551 441 aa23.29■■□□□ 1.32
PSEN1-224ENST00000559361 LY75O60449 1722 aa23.28■■□□□ 1.32
PSEN1-224ENST00000559361 DDX54Q8TDD1 881 aaKnown RBP23.28■■□□□ 1.32
PSEN1-224ENST00000559361 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
PSEN1-224ENST00000559361 GIGYF1O75420 1035 aaPredicted RBP23.27■■□□□ 1.32
PSEN1-224ENST00000559361 FAM208AQ9UK61 1670 aaKnown RBP23.27■■□□□ 1.32
PSEN1-224ENST00000559361 SHANK3Q9BYB0 1731 aa23.27■■□□□ 1.32
PSEN1-224ENST00000559361 HDGFL2Q7Z4V5 671 aaPredicted RBP23.26■■□□□ 1.31
PSEN1-224ENST00000559361 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
PSEN1-224ENST00000559361 TFCP2L1Q9NZI6 479 aa23.26■■□□□ 1.31
PSEN1-224ENST00000559361 NSD2O96028 1365 aa23.26■■□□□ 1.31
PSEN1-224ENST00000559361 ANKRD36BQ8N2N9 1353 aa23.26■■□□□ 1.31
PSEN1-224ENST00000559361 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
PSEN1-224ENST00000559361 KCNQ4P56696 695 aa23.25■■□□□ 1.31
PSEN1-224ENST00000559361 KLHL34Q8N239 644 aa23.24■■□□□ 1.31
PSEN1-224ENST00000559361 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
PSEN1-224ENST00000559361 A0A1W2PP64 1363 aa23.23■■□□□ 1.31
PSEN1-224ENST00000559361 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
PSEN1-224ENST00000559361 TERF2IPQ9NYB0 399 aa23.21■■□□□ 1.31
PSEN1-224ENST00000559361 GRIN3BO60391 1043 aa23.2■■□□□ 1.3
PSEN1-224ENST00000559361 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.3
PSEN1-224ENST00000559361 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
PSEN1-224ENST00000559361 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
PSEN1-224ENST00000559361 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
PSEN1-224ENST00000559361 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-224ENST00000559361 RGPD2P0DJD1 1756 aa23.19■■□□□ 1.3
PSEN1-224ENST00000559361 COL23A1Q86Y22 540 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-224ENST00000559361 ZCRB1Q8TBF4 217 aaKnown RBP23.18■■□□□ 1.3
PSEN1-224ENST00000559361 MAP3K19Q56UN5 1328 aa23.17■■□□□ 1.3
PSEN1-224ENST00000559361 HOXC9P31274 260 aa23.17■■□□□ 1.3
PSEN1-224ENST00000559361 CCNL1Q9UK58 526 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-224ENST00000559361 MEGF6O75095 1541 aa23.15■■□□□ 1.3
PSEN1-224ENST00000559361 FBLN1P23142 703 aa23.13■■□□□ 1.29
PSEN1-224ENST00000559361 COG3Q96JB2 828 aa23.12■■□□□ 1.29
PSEN1-224ENST00000559361 AMPHP49418 695 aa23.11■■□□□ 1.29
PSEN1-224ENST00000559361 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
PSEN1-224ENST00000559361 KIF7Q2M1P5 1343 aa23.1■■□□□ 1.29
PSEN1-224ENST00000559361 CD2APQ9Y5K6 639 aa23.1■■□□□ 1.29
PSEN1-224ENST00000559361 MSH5O43196 834 aa23.09■■□□□ 1.29
PSEN1-224ENST00000559361 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
PSEN1-224ENST00000559361 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
PSEN1-224ENST00000559361 TAF1LQ8IZX4 1826 aa23.09■■□□□ 1.29
PSEN1-224ENST00000559361 ATP10DQ9P241 1426 aa23.08■■□□□ 1.29
PSEN1-224ENST00000559361 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
PSEN1-224ENST00000559361 C5P01031 1676 aa23.08■■□□□ 1.29
PSEN1-224ENST00000559361 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-224ENST00000559361 MSL1Q68DK7 614 aa23.07■■□□□ 1.28
PSEN1-224ENST00000559361 WASHC2AQ641Q2 1341 aa23.07■■□□□ 1.28
PSEN1-224ENST00000559361 ADCY9O60503 1353 aa23.06■■□□□ 1.28
PSEN1-224ENST00000559361 HMGB2P26583 209 aaKnown RBP23.06■■□□□ 1.28
PSEN1-224ENST00000559361 FLAD1Q8NFF5 587 aa23.06■■□□□ 1.28
PSEN1-224ENST00000559361 RRS1Q15050 365 aaKnown RBP23.02■■□□□ 1.28
PSEN1-224ENST00000559361 RAPGEF4Q8WZA2 1011 aa23.02■■□□□ 1.28
PSEN1-224ENST00000559361 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
PSEN1-224ENST00000559361 USHBP1Q8N6Y0 703 aa23.01■■□□□ 1.27
PSEN1-224ENST00000559361 GPBP1L1Q9HC44 474 aaPredicted RBP23.01■■□□□ 1.27
PSEN1-224ENST00000559361 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
PSEN1-224ENST00000559361 FYB1O15117 783 aa23■■□□□ 1.27
PSEN1-224ENST00000559361 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
PSEN1-224ENST00000559361 ITGB4P16144 1822 aa23■■□□□ 1.27
PSEN1-224ENST00000559361 UBR3Q6ZT12 1888 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 HSPA6P17066 643 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 PCDH11XQ9BZA7 1347 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 PCDH11YQ9BZA8 1340 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
PSEN1-224ENST00000559361 CYP27B1O15528 508 aa22.98■■□□□ 1.27
PSEN1-224ENST00000559361 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
PSEN1-224ENST00000559361 MPRIPQ6WCQ1 1025 aa22.97■■□□□ 1.27
PSEN1-224ENST00000559361 INSRP06213 1382 aa22.97■■□□□ 1.27
PSEN1-224ENST00000559361 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
PSEN1-224ENST00000559361 SMG6Q86US8 1419 aaKnown RBP22.96■■□□□ 1.27
PSEN1-224ENST00000559361 MAP2P11137 1827 aaKnown RBP22.95■■□□□ 1.26
PSEN1-224ENST00000559361 SMARCC1Q92922 1105 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-224ENST00000559361 GGNBP2Q9H3C7 697 aa22.95■■□□□ 1.26
PSEN1-224ENST00000559361 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
PSEN1-224ENST00000559361 IGSF1Q8N6C5 1336 aa22.93■■□□□ 1.26
PSEN1-224ENST00000559361 PKD1L3Q7Z443 1732 aa22.92■■□□□ 1.26
PSEN1-224ENST00000559361 NKX1-1Q15270 411 aaPredicted RBP22.92■■□□□ 1.26
PSEN1-224ENST00000559361 PIGBQ92521 554 aa22.92■■□□□ 1.26
PSEN1-224ENST00000559361 AK7Q96M32 723 aa22.92■■□□□ 1.26
PSEN1-224ENST00000559361 FLT4P35916 1363 aa22.91■■□□□ 1.26
PSEN1-224ENST00000559361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.91■■□□□ 1.26
PSEN1-224ENST00000559361 SMIM5Q71RC9 77 aa22.91■■□□□ 1.26
PSEN1-224ENST00000559361 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
PSEN1-224ENST00000559361 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
PSEN1-224ENST00000559361 KIF3CO14782 793 aa22.9■■□□□ 1.26
PSEN1-224ENST00000559361 SSFA2P28290 1259 aa22.9■■□□□ 1.26
PSEN1-224ENST00000559361 PANK3Q9H999 370 aa22.9■■□□□ 1.26
PSEN1-224ENST00000559361 NCAPD2Q15021 1401 aa22.9■■□□□ 1.26
PSEN1-224ENST00000559361 CICQ96RK0 1608 aaPredicted RBP22.87■■□□□ 1.25
PSEN1-224ENST00000559361 PHF14O94880 888 aa22.87■■□□□ 1.25
PSEN1-224ENST00000559361 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
PSEN1-224ENST00000559361 LOC102724428A0A0B4J2F2 783 aa22.86■■□□□ 1.25
PSEN1-224ENST00000559361 SIK1P57059 783 aa22.86■■□□□ 1.25
PSEN1-224ENST00000559361 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
PSEN1-224ENST00000559361 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
PSEN1-224ENST00000559361 WWC3Q9ULE0 1092 aa22.85■■□□□ 1.25
PSEN1-224ENST00000559361 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms