RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PARD3Q8TEW0 1356 aa25.36■■□□□ 1.65
CASC4-209ENST00000559222 AEBP1Q8IUX7 1158 aa25.36■■□□□ 1.65
CASC4-209ENST00000559222 DDX54Q8TDD1 881 aaKnown RBP25.36■■□□□ 1.65
CASC4-209ENST00000559222 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
CASC4-209ENST00000559222 TOGARAM1Q9Y4F4 1720 aa25.35■■□□□ 1.65
CASC4-209ENST00000559222 TATP17735 454 aaPredicted RBP25.35■■□□□ 1.65
CASC4-209ENST00000559222 PPP2R1AP30153 589 aa25.35■■□□□ 1.65
CASC4-209ENST00000559222 CCDC125Q86Z20 511 aa25.35■■□□□ 1.65
CASC4-209ENST00000559222 BCL9O00512 1426 aa25.35■■□□□ 1.65
CASC4-209ENST00000559222 ZCRB1Q8TBF4 217 aaKnown RBP25.34■■□□□ 1.65
CASC4-209ENST00000559222 ACSBG1Q96GR2 724 aa25.33■■□□□ 1.65
CASC4-209ENST00000559222 BTAF1O14981 1849 aa25.33■■□□□ 1.64
CASC4-209ENST00000559222 KCNQ2O43526 872 aa25.31■■□□□ 1.64
CASC4-209ENST00000559222 SF3B2Q13435 895 aaKnown RBP25.31■■□□□ 1.64
CASC4-209ENST00000559222 RREB1Q92766 1687 aa25.31■■□□□ 1.64
CASC4-209ENST00000559222 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
CASC4-209ENST00000559222 KAT6BQ8WYB5 2073 aa25.29■■□□□ 1.64
CASC4-209ENST00000559222 ZNF316A6NFI3 1004 aaPredicted RBP25.29■■□□□ 1.64
CASC4-209ENST00000559222 CYP27B1O15528 508 aa25.28■■□□□ 1.64
CASC4-209ENST00000559222 APBA3O96018 575 aa25.28■■□□□ 1.64
CASC4-209ENST00000559222 NUP188Q5SRE5 1749 aa25.28■■□□□ 1.64
CASC4-209ENST00000559222 KDRP35968 1356 aa25.28■■□□□ 1.64
CASC4-209ENST00000559222 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
CASC4-209ENST00000559222 SULT6B1Q6IMI4 303 aa25.27■■□□□ 1.64
CASC4-209ENST00000559222 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
CASC4-209ENST00000559222 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
CASC4-209ENST00000559222 BAG6P46379 1132 aa25.26■■□□□ 1.63
CASC4-209ENST00000559222 EZH2Q15910 746 aaKnown RBP25.26■■□□□ 1.63
CASC4-209ENST00000559222 ITGB4P16144 1822 aa25.26■■□□□ 1.63
CASC4-209ENST00000559222 HMOX1P09601 288 aa25.25■■□□□ 1.63
CASC4-209ENST00000559222 PCDH11XQ9BZA7 1347 aa25.25■■□□□ 1.63
CASC4-209ENST00000559222 PCDH11YQ9BZA8 1340 aa25.25■■□□□ 1.63
CASC4-209ENST00000559222 BCL11BQ9C0K0 894 aaPredicted RBP25.24■■□□□ 1.63
CASC4-209ENST00000559222 CAMKK2Q96RR4 588 aa25.23■■□□□ 1.63
CASC4-209ENST00000559222 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
CASC4-209ENST00000559222 SPG7Q9UQ90 795 aa25.2■■□□□ 1.62
CASC4-209ENST00000559222 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
CASC4-209ENST00000559222 PHKG2P15735 406 aa25.18■■□□□ 1.62
CASC4-209ENST00000559222 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
CASC4-209ENST00000559222 CFAP53Q96M91 514 aa25.18■■□□□ 1.62
CASC4-209ENST00000559222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.18■■□□□ 1.625e-6■■□□□ 13.2
CASC4-209ENST00000559222 PLEKHG2Q9H7P9 1386 aa25.17■■□□□ 1.62
CASC4-209ENST00000559222 RALBP1Q15311 655 aa25.16■■□□□ 1.62
CASC4-209ENST00000559222 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
CASC4-209ENST00000559222 KDM6AO15550 1401 aaPredicted RBP25.15■■□□□ 1.62
CASC4-209ENST00000559222 ZNF530Q6P9A1 599 aaPredicted RBP25.15■■□□□ 1.62
CASC4-209ENST00000559222 LY75O60449 1722 aa25.15■■□□□ 1.62
CASC4-209ENST00000559222 NKX1-1Q15270 411 aaPredicted RBP25.14■■□□□ 1.62
CASC4-209ENST00000559222 PLEKHO1Q53GL0 409 aaPredicted RBP25.14■■□□□ 1.62
CASC4-209ENST00000559222 PROM2Q8N271 834 aa25.14■■□□□ 1.62
CASC4-209ENST00000559222 SCN11AQ9UI33 1791 aa25.13■■□□□ 1.61
CASC4-209ENST00000559222 PLSCR1O15162 318 aa25.12■■□□□ 1.61
CASC4-209ENST00000559222 IFNL2Q8IZJ0 200 aa25.12■■□□□ 1.61
CASC4-209ENST00000559222 PRKRIP1Q9H875 184 aaPredicted RBP25.12■■□□□ 1.61
CASC4-209ENST00000559222 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
CASC4-209ENST00000559222 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
CASC4-209ENST00000559222 PAPPAQ13219 1627 aa25.1■■□□□ 1.61
CASC4-209ENST00000559222 MTHFSDQ2M296 383 aaKnown RBP25.09■■□□□ 1.61
CASC4-209ENST00000559222 AMOTQ4VCS5 1084 aa25.09■■□□□ 1.61
CASC4-209ENST00000559222 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.61
CASC4-209ENST00000559222 U2AF1L5P0DN76 240 aaPredicted RBP25.08■■□□□ 1.61
CASC4-209ENST00000559222 U2AF1Q01081 240 aaKnown RBP eCLIP25.08■■□□□ 1.61
CASC4-209ENST00000559222 PRKAR2BP31323 418 aa25.07■■□□□ 1.6
CASC4-209ENST00000559222 TXNRD1Q16881 649 aa25.07■■□□□ 1.6
CASC4-209ENST00000559222 MPRIPQ6WCQ1 1025 aa25.07■■□□□ 1.6
CASC4-209ENST00000559222 PHACTR3Q96KR7 559 aa25.06■■□□□ 1.6
CASC4-209ENST00000559222 ANO8Q9HCE9 1232 aaPredicted RBP25.06■■□□□ 1.6
CASC4-209ENST00000559222 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
CASC4-209ENST00000559222 PSDA5PKW4 1024 aaPredicted RBP25.05■■□□□ 1.6
CASC4-209ENST00000559222 KCNQ4P56696 695 aa25.05■■□□□ 1.6
CASC4-209ENST00000559222 PIGBQ92521 554 aa25.05■■□□□ 1.6
CASC4-209ENST00000559222 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
CASC4-209ENST00000559222 C1orf141Q5JVX7 400 aa25.03■■□□□ 1.6
CASC4-209ENST00000559222 TUBGCP6Q96RT7 1819 aa25.02■■□□□ 1.6
CASC4-209ENST00000559222 DLG5Q8TDM6 1919 aa25.02■■□□□ 1.6
CASC4-209ENST00000559222 DCAF5Q96JK2 942 aa25.02■■□□□ 1.6
CASC4-209ENST00000559222 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
CASC4-209ENST00000559222 R3HDM1Q15032 1099 aaKnown RBP25.01■■□□□ 1.59
CASC4-209ENST00000559222 AKAP4Q5JQC9 854 aa25.01■■□□□ 1.59
CASC4-209ENST00000559222 LGR6Q9HBX8 967 aa25.01■■□□□ 1.59
CASC4-209ENST00000559222 MRC1P22897 1456 aa25.01■■□□□ 1.59
CASC4-209ENST00000559222 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
CASC4-209ENST00000559222 PALLDQ8WX93 1383 aa25■■□□□ 1.59
CASC4-209ENST00000559222 C5P01031 1676 aa25■■□□□ 1.59
CASC4-209ENST00000559222 SIPA1L3O60292 1781 aaPredicted RBP24.99■■□□□ 1.59
CASC4-209ENST00000559222 HSP90AB1P08238 724 aaKnown RBP24.99■■□□□ 1.59
CASC4-209ENST00000559222 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
CASC4-209ENST00000559222 ASAP1Q9ULH1 1129 aa24.98■■□□□ 1.59
CASC4-209ENST00000559222 MAP3K5Q99683 1374 aa24.97■■□□□ 1.59
CASC4-209ENST00000559222 FCHSD2O94868 740 aa24.97■■□□□ 1.59
CASC4-209ENST00000559222 CASZ1Q86V15 1759 aa24.96■■□□□ 1.59
CASC4-209ENST00000559222 ERVV-2B6SEH9 535 aa24.96■■□□□ 1.59
CASC4-209ENST00000559222 RNMTO43148 476 aaKnown RBP24.96■■□□□ 1.59
CASC4-209ENST00000559222 PLEKHF1Q96S99 279 aa24.96■■□□□ 1.59
CASC4-209ENST00000559222 ZNF827Q17R98 1081 aa24.95■■□□□ 1.58
CASC4-209ENST00000559222 ATG3Q9NT62 314 aa24.95■■□□□ 1.58
CASC4-209ENST00000559222 CABP4P57796 275 aa24.94■■□□□ 1.58
CASC4-209ENST00000559222 GAS2L2Q8NHY3 880 aa24.94■■□□□ 1.58
CASC4-209ENST00000559222 NFATC2IPQ8NCF5 419 aa24.93■■□□□ 1.58
CASC4-209ENST00000559222 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms