RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
RNF111-204ENST00000559077 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
RNF111-204ENST00000559077 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
RNF111-204ENST00000559077 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
RNF111-204ENST00000559077 INO80Q9ULG1 1556 aaPredicted RBP12.37□□□□□ -0.43
RNF111-204ENST00000559077 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
RNF111-204ENST00000559077 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
RNF111-204ENST00000559077 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
RNF111-204ENST00000559077 H3BM21 787 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 JUNDP17535 347 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 ITGAEP38570 1179 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 USP46P62068 366 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 DUOX2Q9NRD8 1548 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 NAIPQ13075 1403 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
RNF111-204ENST00000559077 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 RICTORQ6R327 1708 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 GUCA2AQ02747 115 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 TSPOAP1O95153 1857 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 ERBINQ96RT1 1412 aa12.35□□□□□ -0.43
RNF111-204ENST00000559077 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
RNF111-204ENST00000559077 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
RNF111-204ENST00000559077 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
RNF111-204ENST00000559077 HOXA2O43364 376 aa12.32□□□□□ -0.44
RNF111-204ENST00000559077 ZMYND10O75800 440 aa12.32□□□□□ -0.44
RNF111-204ENST00000559077 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
RNF111-204ENST00000559077 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
RNF111-204ENST00000559077 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
RNF111-204ENST00000559077 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
RNF111-204ENST00000559077 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
RNF111-204ENST00000559077 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
RNF111-204ENST00000559077 AFAP1Q8N556 730 aa12.31□□□□□ -0.44
RNF111-204ENST00000559077 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 SIAH2O43255 324 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 CLCN1P35523 988 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
RNF111-204ENST00000559077 CHIC2Q9UKJ5 165 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 FRMPD1Q5SYB0 1578 aa12.3□□□□□ -0.44
RNF111-204ENST00000559077 KIDINS220Q9ULH0 1771 aa12.29□□□□□ -0.44
RNF111-204ENST00000559077 LOC100996750A0A140TA64 210 aa12.29□□□□□ -0.44
RNF111-204ENST00000559077 KRTAP4-6Q9BYQ5 205 aa12.29□□□□□ -0.44
RNF111-204ENST00000559077 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
RNF111-204ENST00000559077 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
RNF111-204ENST00000559077 SCARF1Q14162 830 aa12.28□□□□□ -0.44
RNF111-204ENST00000559077 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
RNF111-204ENST00000559077 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
RNF111-204ENST00000559077 KDM6BO15054 1643 aa12.28□□□□□ -0.44
RNF111-204ENST00000559077 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
RNF111-204ENST00000559077 A2MP01023 1474 aa12.27□□□□□ -0.44
RNF111-204ENST00000559077 ARHGEF40Q8TER5 1519 aa12.27□□□□□ -0.44
RNF111-204ENST00000559077 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.44
RNF111-204ENST00000559077 NUTM1Q86Y26 1132 aa12.27□□□□□ -0.45
RNF111-204ENST00000559077 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
RNF111-204ENST00000559077 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
RNF111-204ENST00000559077 SH3BP2P78314 561 aa12.26□□□□□ -0.45
RNF111-204ENST00000559077 RETREG3Q86VR2 466 aa12.26□□□□□ -0.45
RNF111-204ENST00000559077 KRI1Q8N9T8 703 aaKnown RBP12.26□□□□□ -0.45
RNF111-204ENST00000559077 KDM5DQ9BY66 1539 aa12.26□□□□□ -0.45
RNF111-204ENST00000559077 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
RNF111-204ENST00000559077 PURBQ96QR8 312 aaKnown RBP12.25□□□□□ -0.45
RNF111-204ENST00000559077 ATP10AO60312 1499 aa12.25□□□□□ -0.45
RNF111-204ENST00000559077 AGLP35573 1532 aa12.25□□□□□ -0.45
RNF111-204ENST00000559077 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
RNF111-204ENST00000559077 SOBPA7XYQ1 873 aa12.24□□□□□ -0.45
RNF111-204ENST00000559077 UNC13BO14795 1591 aa12.24□□□□□ -0.45
RNF111-204ENST00000559077 MS4A1P11836 297 aa12.24□□□□□ -0.45
RNF111-204ENST00000559077 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
RNF111-204ENST00000559077 KANK1Q14678 1352 aa12.23□□□□□ -0.45
RNF111-204ENST00000559077 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
RNF111-204ENST00000559077 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
RNF111-204ENST00000559077 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
RNF111-204ENST00000559077 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
RNF111-204ENST00000559077 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
RNF111-204ENST00000559077 NNTQ13423 1086 aa12.22□□□□□ -0.45
RNF111-204ENST00000559077 SUZ12Q15022 739 aaKnown RBP12.22□□□□□ -0.45
RNF111-204ENST00000559077 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
RNF111-204ENST00000559077 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
RNF111-204ENST00000559077 AMHR2Q16671 573 aa12.21□□□□□ -0.45
RNF111-204ENST00000559077 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
RNF111-204ENST00000559077 WDR4P57081 412 aaKnown RBP12.2□□□□□ -0.46
RNF111-204ENST00000559077 BAP1Q92560 729 aa12.19□□□□□ -0.46
RNF111-204ENST00000559077 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
RNF111-204ENST00000559077 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
RNF111-204ENST00000559077 IQGAP3Q86VI3 1631 aa12.19□□□□□ -0.46
RNF111-204ENST00000559077 FDX1P10109 184 aa12.18□□□□□ -0.46
RNF111-204ENST00000559077 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
RNF111-204ENST00000559077 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
RNF111-204ENST00000559077 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
RNF111-204ENST00000559077 ZC3H13Q5T200 1668 aaKnown RBP12.18□□□□□ -0.46
RNF111-204ENST00000559077 NUP155O75694 1391 aa12.18□□□□□ -0.46
RNF111-204ENST00000559077 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
RNF111-204ENST00000559077 LMTK2Q8IWU2 1503 aa12.17□□□□□ -0.46
RNF111-204ENST00000559077 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
RNF111-204ENST00000559077 VWDEQ8N2E2 1590 aa12.17□□□□□ -0.46
RNF111-204ENST00000559077 KIF3BO15066 747 aa12.16□□□□□ -0.46
RNF111-204ENST00000559077 MAN1A2O60476 641 aa12.16□□□□□ -0.46
RNF111-204ENST00000559077 ADH1CP00326 375 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms