RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 KCNQ4P56696 695 aa11.24□□□□□ -0.61
AP3S2-208ENST00000558999 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
AP3S2-208ENST00000558999 DOT1LQ8TEK3 1739 aa11.23□□□□□ -0.61
AP3S2-208ENST00000558999 KIF3CO14782 793 aa11.23□□□□□ -0.61
AP3S2-208ENST00000558999 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
AP3S2-208ENST00000558999 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
AP3S2-208ENST00000558999 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
AP3S2-208ENST00000558999 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
AP3S2-208ENST00000558999 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
AP3S2-208ENST00000558999 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
AP3S2-208ENST00000558999 DNAJC5GQ8N7S2 189 aa11.22□□□□□ -0.61
AP3S2-208ENST00000558999 NSD2O96028 1365 aa11.21□□□□□ -0.61
AP3S2-208ENST00000558999 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.62
AP3S2-208ENST00000558999 C5P01031 1676 aa11.2□□□□□ -0.62
AP3S2-208ENST00000558999 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
AP3S2-208ENST00000558999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.628e-7■■□□□ 13.6
AP3S2-208ENST00000558999 USP47Q96K76 1375 aa11.19□□□□□ -0.62
AP3S2-208ENST00000558999 TOMM70O94826 608 aa11.19□□□□□ -0.62
AP3S2-208ENST00000558999 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
AP3S2-208ENST00000558999 IP6K1Q92551 441 aa11.19□□□□□ -0.62
AP3S2-208ENST00000558999 NME9Q86XW9 330 aa11.18□□□□□ -0.62
AP3S2-208ENST00000558999 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
AP3S2-208ENST00000558999 IGSF1Q8N6C5 1336 aa11.17□□□□□ -0.62
AP3S2-208ENST00000558999 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
AP3S2-208ENST00000558999 CICQ96RK0 1608 aaPredicted RBP11.17□□□□□ -0.62
AP3S2-208ENST00000558999 RGPD2P0DJD1 1756 aa11.16□□□□□ -0.62
AP3S2-208ENST00000558999 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
AP3S2-208ENST00000558999 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
AP3S2-208ENST00000558999 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
AP3S2-208ENST00000558999 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
AP3S2-208ENST00000558999 CGNL1Q0VF96 1302 aa11.14□□□□□ -0.63
AP3S2-208ENST00000558999 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
AP3S2-208ENST00000558999 C4BP0C0L5 1744 aa11.14□□□□□ -0.63
AP3S2-208ENST00000558999 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
AP3S2-208ENST00000558999 KCNA4P22459 653 aa11.13□□□□□ -0.63
AP3S2-208ENST00000558999 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
AP3S2-208ENST00000558999 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
AP3S2-208ENST00000558999 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
AP3S2-208ENST00000558999 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
AP3S2-208ENST00000558999 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 ITGB4P16144 1822 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
AP3S2-208ENST00000558999 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 MEGF6O75095 1541 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
AP3S2-208ENST00000558999 HOXC9P31274 260 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 PRELPP51888 382 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
AP3S2-208ENST00000558999 AK7Q96M32 723 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
AP3S2-208ENST00000558999 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
AP3S2-208ENST00000558999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
AP3S2-208ENST00000558999 SSFA2P28290 1259 aa11.1□□□□□ -0.63
AP3S2-208ENST00000558999 AMPHP49418 695 aa11.1□□□□□ -0.63
AP3S2-208ENST00000558999 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
AP3S2-208ENST00000558999 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
AP3S2-208ENST00000558999 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
AP3S2-208ENST00000558999 TGFB2P61812 414 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 FSTL1Q12841 308 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 MAP2P11137 1827 aaKnown RBP11.09□□□□□ -0.63
AP3S2-208ENST00000558999 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
AP3S2-208ENST00000558999 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 CAPN15O75808 1086 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
AP3S2-208ENST00000558999 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 C16orf71Q8IYS4 520 aaPredicted RBP11.08□□□□□ -0.64
AP3S2-208ENST00000558999 COG3Q96JB2 828 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
AP3S2-208ENST00000558999 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
AP3S2-208ENST00000558999 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
AP3S2-208ENST00000558999 BRCA1P38398 1863 aaKnown RBP11.07□□□□□ -0.64
AP3S2-208ENST00000558999 PHF14O94880 888 aa11.07□□□□□ -0.64
AP3S2-208ENST00000558999 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
AP3S2-208ENST00000558999 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
AP3S2-208ENST00000558999 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
AP3S2-208ENST00000558999 BCS1LQ9Y276 419 aa11.06□□□□□ -0.64
AP3S2-208ENST00000558999 PCNTO95613 3336 aa11.06□□□□□ -0.64
AP3S2-208ENST00000558999 C10orf71Q711Q0 1435 aa11.05□□□□□ -0.64
AP3S2-208ENST00000558999 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
AP3S2-208ENST00000558999 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
AP3S2-208ENST00000558999 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 CYP27B1O15528 508 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 MMP10P09238 476 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 FBLN1P23142 703 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 SIK1P57059 783 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 HTRA3P83110 453 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
AP3S2-208ENST00000558999 PIGBQ92521 554 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms