RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MSH6P52701 1360 aa13.69□□□□□ -0.22
CSPG4P5-201ENST00000558731 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
CSPG4P5-201ENST00000558731 IP6K1Q92551 441 aa13.69□□□□□ -0.22
CSPG4P5-201ENST00000558731 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
CSPG4P5-201ENST00000558731 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P5-201ENST00000558731 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
CSPG4P5-201ENST00000558731 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P5-201ENST00000558731 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
CSPG4P5-201ENST00000558731 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
CSPG4P5-201ENST00000558731 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P5-201ENST00000558731 F6X3S4 739 aa13.67□□□□□ -0.22
CSPG4P5-201ENST00000558731 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
CSPG4P5-201ENST00000558731 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
CSPG4P5-201ENST00000558731 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 ANKRD26Q9UPS8 1709 aa13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
CSPG4P5-201ENST00000558731 MON2Q7Z3U7 1717 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 ADGRB2O60241 1585 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 ANXA1P04083 346 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
CSPG4P5-201ENST00000558731 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
CSPG4P5-201ENST00000558731 CHL1O00533 1208 aa13.63□□□□□ -0.23
CSPG4P5-201ENST00000558731 API5Q9BZZ5 524 aaKnown RBP13.63□□□□□ -0.23
CSPG4P5-201ENST00000558731 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
CSPG4P5-201ENST00000558731 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
CSPG4P5-201ENST00000558731 AKAP12Q02952 1782 aa13.63□□□□□ -0.23
CSPG4P5-201ENST00000558731 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 G2E3Q7L622 706 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 EVA1CP58658 441 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P5-201ENST00000558731 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
CSPG4P5-201ENST00000558731 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
CSPG4P5-201ENST00000558731 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
CSPG4P5-201ENST00000558731 KCNQ3O43525 872 aa13.61□□□□□ -0.23
CSPG4P5-201ENST00000558731 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
CSPG4P5-201ENST00000558731 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
CSPG4P5-201ENST00000558731 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
CSPG4P5-201ENST00000558731 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
CSPG4P5-201ENST00000558731 ARXQ96QS3 562 aa13.6□□□□□ -0.23
CSPG4P5-201ENST00000558731 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 DDX54Q8TDD1 881 aaKnown RBP13.59□□□□□ -0.23
CSPG4P5-201ENST00000558731 PIK3C2AO00443 1686 aa13.58□□□□□ -0.23
CSPG4P5-201ENST00000558731 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P5-201ENST00000558731 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P5-201ENST00000558731 PEAK1Q9H792 1746 aa13.58□□□□□ -0.24
CSPG4P5-201ENST00000558731 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
CSPG4P5-201ENST00000558731 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
CSPG4P5-201ENST00000558731 TOPAZ1Q8N9V7 1692 aa13.57□□□□□ -0.24
CSPG4P5-201ENST00000558731 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
CSPG4P5-201ENST00000558731 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
CSPG4P5-201ENST00000558731 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P5-201ENST00000558731 MEIS3Q99687 375 aa13.56□□□□□ -0.24
CSPG4P5-201ENST00000558731 EIF5BO60841 1220 aaKnown RBP13.56□□□□□ -0.24
CSPG4P5-201ENST00000558731 CHMP4BQ9H444 224 aaKnown RBP13.56□□□□□ -0.24
CSPG4P5-201ENST00000558731 PHAXQ9H814 394 aaKnown RBP13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 FLIIQ13045 1269 aa13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 ERBB3P21860 1342 aa13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P5-201ENST00000558731 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 UPF2Q9HAU5 1272 aaKnown RBP13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 MYL6BP14649 208 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 KDRP35968 1356 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 MST1RQ04912 1400 aa13.54□□□□□ -0.24
CSPG4P5-201ENST00000558731 NFATC2IPQ8NCF5 419 aa13.53□□□□□ -0.24
CSPG4P5-201ENST00000558731 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
CSPG4P5-201ENST00000558731 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
CSPG4P5-201ENST00000558731 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
CSPG4P5-201ENST00000558731 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms