RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PLEKHG1Q9ULL1 1385 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 BMP2KLQ5H9B9 411 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 NSD3Q9BZ95 1437 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 PKP1Q13835 747 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 TPRNQ4KMQ1 711 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 KDM5AP29375 1690 aaKnown RBP6.21□□□□□ -1.41
HMG20A-204ENST00000558288 IBTKQ9P2D0 1353 aaPredicted RBP6.21□□□□□ -1.41
HMG20A-204ENST00000558288 CBX1P83916 185 aa6.21□□□□□ -1.41
HMG20A-204ENST00000558288 SLC12A5Q9H2X9 1139 aa6.21□□□□□ -1.41
HMG20A-204ENST00000558288 ZBTB40Q9NUA8 1239 aa6.21□□□□□ -1.41
HMG20A-204ENST00000558288 LMBRD1Q9NUN5 540 aa6.21□□□□□ -1.41
HMG20A-204ENST00000558288 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.21□□□□□ -1.41
HMG20A-204ENST00000558288 TRPC5Q9UL62 973 aaPredicted RBP6.21□□□□□ -1.41
HMG20A-204ENST00000558288 AK9Q5TCS8 1911 aa6.21□□□□□ -1.41
HMG20A-204ENST00000558288 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 CCDC94Q9BW85 323 aaPredicted RBP6.21□□□□□ -1.42
HMG20A-204ENST00000558288 SOX12O15370 315 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 SLC24A1O60721 1099 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 CDC45O75419 566 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 NUTM2GQ5VZR2 741 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 TSC1Q92574 1164 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 JARID2Q92833 1246 aaPredicted RBP6.21□□□□□ -1.42
HMG20A-204ENST00000558288 CHAMP1Q96JM3 812 aa6.21□□□□□ -1.42
HMG20A-204ENST00000558288 CCDC27Q2M243 656 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 NGDNQ8NEJ9 315 aaKnown RBP6.2□□□□□ -1.42
HMG20A-204ENST00000558288 MYOM1P52179 1685 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 ARHGAP31Q2M1Z3 1444 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 PSDA5PKW4 1024 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-204ENST00000558288 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-204ENST00000558288 MCM5P33992 734 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 RABEP1Q15276 862 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 FAM182BQ5T319 152 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 STRN4Q9NRL3 753 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 TRAK1Q9UPV9 953 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 ROBO1Q9Y6N7 1651 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 METP08581 1390 aa6.2□□□□□ -1.42
HMG20A-204ENST00000558288 FAM177BA6PVY3 158 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
HMG20A-204ENST00000558288 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
HMG20A-204ENST00000558288 GPT2Q8TD30 523 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 PDLIM2Q96JY6 352 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 LRSAM1Q6UWE0 723 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 ZGPATQ8N5A5 531 aaKnown RBP6.19□□□□□ -1.42
HMG20A-204ENST00000558288 NPHP3Q7Z494 1330 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 MINK1Q8N4C8 1332 aaPredicted RBP6.19□□□□□ -1.42
HMG20A-204ENST00000558288 APBB1O00213 710 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 ST18O60284 1047 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 PLCB2Q00722 1185 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 DEFB132Q7Z7B7 95 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 GCC1Q96CN9 775 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 ZNF830Q96NB3 372 aaPredicted RBP6.19□□□□□ -1.42
HMG20A-204ENST00000558288 TMEM63CQ9P1W3 806 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 UNC13BO14795 1591 aa6.19□□□□□ -1.42
HMG20A-204ENST00000558288 DMTNQ08495 405 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 CLEC17AQ6ZS10 378 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.18□□□□□ -1.425e-6■■□□□ 12.1
HMG20A-204ENST00000558288 DEPDC5O75140 1603 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 ARHGAP23Q9P227 1491 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 TMPOP42166 694 aaKnown RBP6.18□□□□□ -1.42
HMG20A-204ENST00000558288 PPP4R3BQ5MIZ7 849 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
HMG20A-204ENST00000558288 KRT28Q7Z3Y7 464 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 IQGAP3Q86VI3 1631 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 SLIT1O75093 1534 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 ELL2O00472 640 aaPredicted RBP6.18□□□□□ -1.42
HMG20A-204ENST00000558288 EVA1CP58658 441 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 TSPY26PQ9H489 355 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 ZC3H13Q5T200 1668 aaKnown RBP6.18□□□□□ -1.42
HMG20A-204ENST00000558288 MAST1Q9Y2H9 1570 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 ADGRB3O60242 1522 aa6.18□□□□□ -1.42
HMG20A-204ENST00000558288 NOS1P29475 1434 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 ADGRF5Q8IZF2 1346 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 PHLPP1O60346 1717 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 SPDYE4A6NLX3 237 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 CASC1Q6TDU7 716 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 MYRIPQ8NFW9 859 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 CWC22Q9HCG8 908 aaKnown RBP6.17□□□□□ -1.42
HMG20A-204ENST00000558288 NSFL1CQ9UNZ2 370 aaKnown RBP6.17□□□□□ -1.42
HMG20A-204ENST00000558288 FAM98CQ17RN3 349 aaKnown RBP6.17□□□□□ -1.42
HMG20A-204ENST00000558288 C17orf53Q8N3J3 647 aaPredicted RBP6.17□□□□□ -1.42
HMG20A-204ENST00000558288 STAC3Q96MF2 364 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 STRCP1A6NGW2 1772 aa6.17□□□□□ -1.42
HMG20A-204ENST00000558288 CHMP4BQ9H444 224 aaKnown RBP6.17□□□□□ -1.42
HMG20A-204ENST00000558288 IGSF3O75054 1194 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 MBD3O95983 291 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 ZSCAN20P17040 1043 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 HMGN5P82970 282 aaKnown RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 UTP14CQ5TAP6 766 aaKnown RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 INTS3Q68E01 1043 aaKnown RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 SYAP1Q96A49 352 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 PRAM1Q96QH2 718 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 PRDM11Q9NQV5 511 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 KIF3AQ9Y496 699 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 SHPRHQ149N8 1683 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 ZC3H6P61129 1189 aaKnown RBP6.16□□□□□ -1.42
HMG20A-204ENST00000558288 FGD1P98174 961 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 TRIM35Q9UPQ4 493 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 MROH1Q8NDA8 1641 aa6.16□□□□□ -1.42
HMG20A-204ENST00000558288 ABCC11Q96J66 1382 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms