RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
HMGB1P8-201ENST00000558211 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.23
HMGB1P8-201ENST00000558211 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
HMGB1P8-201ENST00000558211 DPYSL4O14531 572 aa16.49■□□□□ 0.23
HMGB1P8-201ENST00000558211 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
HMGB1P8-201ENST00000558211 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
HMGB1P8-201ENST00000558211 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
HMGB1P8-201ENST00000558211 LCE2DQ5TA82 110 aaPredicted RBP16.48■□□□□ 0.23
HMGB1P8-201ENST00000558211 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 ST18O60284 1047 aa16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 TBC1D12O60347 775 aa16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 HOXB1P14653 301 aaPredicted RBP16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 ARSIQ5FYB1 569 aa16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 NME9Q86XW9 330 aa16.47■□□□□ 0.23
HMGB1P8-201ENST00000558211 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 BRD4O60885 1362 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P8-201ENST00000558211 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 KHSRPQ92945 711 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 JCADQ9P266 1359 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 ALS2Q96Q42 1657 aa16.45■□□□□ 0.22
HMGB1P8-201ENST00000558211 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
HMGB1P8-201ENST00000558211 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
HMGB1P8-201ENST00000558211 GGNBP2Q9H3C7 697 aa16.44■□□□□ 0.22
HMGB1P8-201ENST00000558211 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
HMGB1P8-201ENST00000558211 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
HMGB1P8-201ENST00000558211 FYB1O15117 783 aa16.42■□□□□ 0.22
HMGB1P8-201ENST00000558211 PDIA6Q15084 440 aa16.42■□□□□ 0.22
HMGB1P8-201ENST00000558211 CGNL1Q0VF96 1302 aa16.42■□□□□ 0.22
HMGB1P8-201ENST00000558211 SHPRHQ149N8 1683 aa16.41■□□□□ 0.22
HMGB1P8-201ENST00000558211 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
HMGB1P8-201ENST00000558211 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
HMGB1P8-201ENST00000558211 COG3Q96JB2 828 aa16.4■□□□□ 0.22
HMGB1P8-201ENST00000558211 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
HMGB1P8-201ENST00000558211 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
HMGB1P8-201ENST00000558211 EVI5O60447 810 aa16.39■□□□□ 0.21
HMGB1P8-201ENST00000558211 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
HMGB1P8-201ENST00000558211 NUDT7P0C024 238 aa16.39■□□□□ 0.21
HMGB1P8-201ENST00000558211 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
HMGB1P8-201ENST00000558211 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
HMGB1P8-201ENST00000558211 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 NBR1Q14596 966 aa16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 MED1Q15648 1581 aaPredicted RBP16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 USP31Q70CQ4 1352 aa16.37■□□□□ 0.21
HMGB1P8-201ENST00000558211 GCP02774 474 aa16.36■□□□□ 0.21
HMGB1P8-201ENST00000558211 FBLN1P23142 703 aa16.36■□□□□ 0.21
HMGB1P8-201ENST00000558211 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
HMGB1P8-201ENST00000558211 MEX3CQ5U5Q3 659 aaKnown RBP16.36■□□□□ 0.21
HMGB1P8-201ENST00000558211 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
HMGB1P8-201ENST00000558211 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
HMGB1P8-201ENST00000558211 USP19O94966 1318 aa16.35■□□□□ 0.21
HMGB1P8-201ENST00000558211 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 ABCA3Q99758 1704 aa16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 TPRNQ4KMQ1 711 aa16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
HMGB1P8-201ENST00000558211 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.21
HMGB1P8-201ENST00000558211 LRP6O75581 1613 aa16.32■□□□□ 0.2
HMGB1P8-201ENST00000558211 NSD2O96028 1365 aa16.32■□□□□ 0.2
HMGB1P8-201ENST00000558211 CHRNA2Q15822 529 aa16.32■□□□□ 0.2
HMGB1P8-201ENST00000558211 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
HMGB1P8-201ENST00000558211 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
HMGB1P8-201ENST00000558211 USP54Q70EL1 1684 aa16.31■□□□□ 0.2
HMGB1P8-201ENST00000558211 SLIT3O75094 1523 aa16.31■□□□□ 0.2
HMGB1P8-201ENST00000558211 PTGER2P43116 358 aa16.31■□□□□ 0.2
HMGB1P8-201ENST00000558211 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
HMGB1P8-201ENST00000558211 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
HMGB1P8-201ENST00000558211 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
HMGB1P8-201ENST00000558211 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
HMGB1P8-201ENST00000558211 FAM83GA6ND36 823 aa16.29■□□□□ 0.2
HMGB1P8-201ENST00000558211 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
HMGB1P8-201ENST00000558211 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
HMGB1P8-201ENST00000558211 LHX6Q9UPM6 363 aa16.28■□□□□ 0.2
HMGB1P8-201ENST00000558211 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
HMGB1P8-201ENST00000558211 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.2
HMGB1P8-201ENST00000558211 AMPHP49418 695 aa16.27■□□□□ 0.2
HMGB1P8-201ENST00000558211 ARHGEF25Q86VW2 580 aa16.27■□□□□ 0.2
HMGB1P8-201ENST00000558211 NFAT5O94916 1531 aa16.27■□□□□ 0.2
HMGB1P8-201ENST00000558211 LTN1O94822 1766 aa16.27■□□□□ 0.2
HMGB1P8-201ENST00000558211 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
HMGB1P8-201ENST00000558211 SEMA3EO15041 775 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms