RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 WWC3Q9ULE0 1092 aa25.41■■□□□ 1.66
LHX4-202ENST00000558139 ANKRD36BQ8N2N9 1353 aa25.41■■□□□ 1.66
LHX4-202ENST00000558139 HMGB2P26583 209 aaKnown RBP25.4■■□□□ 1.66
LHX4-202ENST00000558139 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.65
LHX4-202ENST00000558139 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
LHX4-202ENST00000558139 TUBGCP6Q96RT7 1819 aa25.38■■□□□ 1.65
LHX4-202ENST00000558139 USP47Q96K76 1375 aa25.34■■□□□ 1.65
LHX4-202ENST00000558139 RBM46Q8TBY0 533 aaKnown RBP25.33■■□□□ 1.65
LHX4-202ENST00000558139 NSD2O96028 1365 aa25.32■■□□□ 1.64
LHX4-202ENST00000558139 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
LHX4-202ENST00000558139 HTRA3P83110 453 aa25.31■■□□□ 1.64
LHX4-202ENST00000558139 RAB3GAP2Q9H2M9 1393 aa25.31■■□□□ 1.64
LHX4-202ENST00000558139 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
LHX4-202ENST00000558139 C16orf71Q8IYS4 520 aaPredicted RBP25.3■■□□□ 1.64
LHX4-202ENST00000558139 NMRK2Q9NPI5 230 aa25.3■■□□□ 1.64
LHX4-202ENST00000558139 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
LHX4-202ENST00000558139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.64
LHX4-202ENST00000558139 LY75O60449 1722 aa25.28■■□□□ 1.64
LHX4-202ENST00000558139 FSTL1Q12841 308 aa25.27■■□□□ 1.64
LHX4-202ENST00000558139 ZCRB1Q8TBF4 217 aaKnown RBP25.27■■□□□ 1.64
LHX4-202ENST00000558139 LTV1Q96GA3 475 aaPredicted RBP25.25■■□□□ 1.63
LHX4-202ENST00000558139 NME9Q86XW9 330 aa25.24■■□□□ 1.63
LHX4-202ENST00000558139 WDR90Q96KV7 1748 aa25.23■■□□□ 1.63
LHX4-202ENST00000558139 AK7Q96M32 723 aa25.23■■□□□ 1.63
LHX4-202ENST00000558139 SLC34A2O95436 690 aa25.22■■□□□ 1.63
LHX4-202ENST00000558139 IP6K1Q92551 441 aa25.22■■□□□ 1.63
LHX4-202ENST00000558139 ARHGAP27Q6ZUM4 889 aa25.2■■□□□ 1.62
LHX4-202ENST00000558139 BCS1LQ9Y276 419 aa25.19■■□□□ 1.62
LHX4-202ENST00000558139 PCNTO95613 3336 aa25.18■■□□□ 1.62
LHX4-202ENST00000558139 PHF14O94880 888 aa25.18■■□□□ 1.62
LHX4-202ENST00000558139 CICQ96RK0 1608 aaPredicted RBP25.18■■□□□ 1.62
LHX4-202ENST00000558139 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
LHX4-202ENST00000558139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.17■■□□□ 1.62
LHX4-202ENST00000558139 PALLDQ8WX93 1383 aa25.16■■□□□ 1.62
LHX4-202ENST00000558139 TGFB2P61812 414 aa25.15■■□□□ 1.62
LHX4-202ENST00000558139 NSD3Q9BZ95 1437 aa25.14■■□□□ 1.62
LHX4-202ENST00000558139 HSPA1AP0DMV8 641 aaKnown RBP25.14■■□□□ 1.62
LHX4-202ENST00000558139 HSPA1BP0DMV9 641 aaKnown RBP25.14■■□□□ 1.62
LHX4-202ENST00000558139 AMIGO3Q86WK7 504 aa25.14■■□□□ 1.62
LHX4-202ENST00000558139 KDM2BQ8NHM5 1336 aa25.12■■□□□ 1.61
LHX4-202ENST00000558139 SSFA2P28290 1259 aa25.12■■□□□ 1.61
LHX4-202ENST00000558139 C9orf131Q5VYM1 1079 aa25.12■■□□□ 1.61
LHX4-202ENST00000558139 SMARCC1Q92922 1105 aaPredicted RBP25.12■■□□□ 1.61
LHX4-202ENST00000558139 LTN1O94822 1766 aa25.12■■□□□ 1.61
LHX4-202ENST00000558139 C5P01031 1676 aa25.11■■□□□ 1.61
LHX4-202ENST00000558139 SBNO2Q9Y2G9 1366 aa25.11■■□□□ 1.61
LHX4-202ENST00000558139 MPRIPQ6WCQ1 1025 aa25.11■■□□□ 1.61
LHX4-202ENST00000558139 CGNL1Q0VF96 1302 aa25.11■■□□□ 1.61
LHX4-202ENST00000558139 A0A0G2JLW4 131 aa25.1■■□□□ 1.61
LHX4-202ENST00000558139 SMIM5Q71RC9 77 aa25.1■■□□□ 1.61
LHX4-202ENST00000558139 SMC1BQ8NDV3 1235 aa25.1■■□□□ 1.61
LHX4-202ENST00000558139 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
LHX4-202ENST00000558139 HDGFL2Q7Z4V5 671 aaPredicted RBP25.09■■□□□ 1.61
LHX4-202ENST00000558139 PXDNLA1KZ92 1463 aa25.09■■□□□ 1.61
LHX4-202ENST00000558139 FCHSD2O94868 740 aa25.08■■□□□ 1.61
LHX4-202ENST00000558139 MMP10P09238 476 aa25.08■■□□□ 1.61
LHX4-202ENST00000558139 MEGF6O75095 1541 aa25.07■■□□□ 1.6
LHX4-202ENST00000558139 RRAGCQ9HB90 399 aa25.07■■□□□ 1.6
LHX4-202ENST00000558139 AMPHP49418 695 aa25.06■■□□□ 1.6
LHX4-202ENST00000558139 TMC1Q8TDI8 760 aa25.06■■□□□ 1.6
LHX4-202ENST00000558139 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
LHX4-202ENST00000558139 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
LHX4-202ENST00000558139 HOXC9P31274 260 aa25.05■■□□□ 1.6
LHX4-202ENST00000558139 FAM208AQ9UK61 1670 aaKnown RBP25.04■■□□□ 1.6
LHX4-202ENST00000558139 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
LHX4-202ENST00000558139 MON2Q7Z3U7 1717 aa25.03■■□□□ 1.6
LHX4-202ENST00000558139 DPEP1P16444 411 aa25.02■■□□□ 1.6
LHX4-202ENST00000558139 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
LHX4-202ENST00000558139 PCDH11XQ9BZA7 1347 aa25.02■■□□□ 1.6
LHX4-202ENST00000558139 PCDH11YQ9BZA8 1340 aa25.02■■□□□ 1.6
LHX4-202ENST00000558139 EDC4Q6P2E9 1401 aaKnown RBP25.02■■□□□ 1.6
LHX4-202ENST00000558139 C10orf71Q711Q0 1435 aa25.02■■□□□ 1.6
LHX4-202ENST00000558139 TATP17735 454 aaPredicted RBP25.01■■□□□ 1.59
LHX4-202ENST00000558139 NBPF6Q5VWK0 638 aa25.01■■□□□ 1.59
LHX4-202ENST00000558139 NBPF4Q96M43 638 aa25.01■■□□□ 1.59
LHX4-202ENST00000558139 KCPQ6ZWJ8 1503 aa25.01■■□□□ 1.59
LHX4-202ENST00000558139 GNPATO15228 680 aa25■■□□□ 1.59
LHX4-202ENST00000558139 TERF2IPQ9NYB0 399 aa25■■□□□ 1.59
LHX4-202ENST00000558139 PCDH10Q9P2E7 1040 aa25■■□□□ 1.59
LHX4-202ENST00000558139 CD163L1Q9NR16 1453 aa25■■□□□ 1.59
LHX4-202ENST00000558139 TAF1LQ8IZX4 1826 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 NLGN1Q8N2Q7 840 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 LINC00116Q8NCU8 138 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 SLC12A5Q9H2X9 1139 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 CCDC87Q9NVE4 849 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 RNF181Q9P0P0 153 aa24.99■■□□□ 1.59
LHX4-202ENST00000558139 LOC102724428A0A0B4J2F2 783 aa24.98■■□□□ 1.59
LHX4-202ENST00000558139 SIK1P57059 783 aa24.98■■□□□ 1.59
LHX4-202ENST00000558139 USHBP1Q8N6Y0 703 aa24.97■■□□□ 1.59
LHX4-202ENST00000558139 TMF1P82094 1093 aa24.96■■□□□ 1.59
LHX4-202ENST00000558139 PIGBQ92521 554 aa24.96■■□□□ 1.59
LHX4-202ENST00000558139 COG3Q96JB2 828 aa24.96■■□□□ 1.59
LHX4-202ENST00000558139 TOGARAM1Q9Y4F4 1720 aa24.95■■□□□ 1.59
LHX4-202ENST00000558139 PIM2Q9P1W9 311 aa24.95■■□□□ 1.58
LHX4-202ENST00000558139 UBR3Q6ZT12 1888 aa24.95■■□□□ 1.58
LHX4-202ENST00000558139 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
LHX4-202ENST00000558139 TRAPPC3LQ5T215 181 aa24.93■■□□□ 1.58
LHX4-202ENST00000558139 CYP27B1O15528 508 aa24.92■■□□□ 1.58
LHX4-202ENST00000558139 FBLN1P23142 703 aa24.92■■□□□ 1.58
LHX4-202ENST00000558139 DALRD3Q5D0E6 543 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms