RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC6B-207ENST00000557764 ZNF692Q9BU19 519 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC6B-207ENST00000557764 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
TRAPPC6B-207ENST00000557764 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
TRAPPC6B-207ENST00000557764 CCNL1Q9UK58 526 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC6B-207ENST00000557764 WWC3Q9ULE0 1092 aa20.84■□□□□ 0.93
TRAPPC6B-207ENST00000557764 LTN1O94822 1766 aa20.82■□□□□ 0.92
TRAPPC6B-207ENST00000557764 DOT1LQ8TEK3 1739 aa20.82■□□□□ 0.92
TRAPPC6B-207ENST00000557764 ANKRD24Q8TF21 1146 aa20.82■□□□□ 0.92
TRAPPC6B-207ENST00000557764 TOMM70O94826 608 aa20.81■□□□□ 0.92
TRAPPC6B-207ENST00000557764 PRELPP51888 382 aa20.8■□□□□ 0.92
TRAPPC6B-207ENST00000557764 WDR90Q96KV7 1748 aa20.8■□□□□ 0.92
TRAPPC6B-207ENST00000557764 ANKRD36BQ8N2N9 1353 aa20.8■□□□□ 0.92
TRAPPC6B-207ENST00000557764 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
TRAPPC6B-207ENST00000557764 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
TRAPPC6B-207ENST00000557764 TNS4Q8IZW8 715 aa20.79■□□□□ 0.92
TRAPPC6B-207ENST00000557764 NSD2O96028 1365 aa20.79■□□□□ 0.92
TRAPPC6B-207ENST00000557764 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
TRAPPC6B-207ENST00000557764 KTN1Q86UP2 1357 aaKnown RBP20.76■□□□□ 0.91
TRAPPC6B-207ENST00000557764 C5P01031 1676 aa20.75■□□□□ 0.91
TRAPPC6B-207ENST00000557764 KLRG1Q96E93 195 aa20.75■□□□□ 0.91
TRAPPC6B-207ENST00000557764 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC6B-207ENST00000557764 HTRA3P83110 453 aa20.74■□□□□ 0.91
TRAPPC6B-207ENST00000557764 JMYQ8N9B5 988 aa20.74■□□□□ 0.91
TRAPPC6B-207ENST00000557764 USP47Q96K76 1375 aa20.73■□□□□ 0.91
TRAPPC6B-207ENST00000557764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAPPC6B-207ENST00000557764 FLAD1Q8NFF5 587 aa20.73■□□□□ 0.91
TRAPPC6B-207ENST00000557764 USP31Q70CQ4 1352 aa20.72■□□□□ 0.91
TRAPPC6B-207ENST00000557764 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
TRAPPC6B-207ENST00000557764 MON2Q7Z3U7 1717 aa20.71■□□□□ 0.91
TRAPPC6B-207ENST00000557764 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC6B-207ENST00000557764 TAF1LQ8IZX4 1826 aa20.7■□□□□ 0.9
TRAPPC6B-207ENST00000557764 NMRK2Q9NPI5 230 aa20.7■□□□□ 0.9
TRAPPC6B-207ENST00000557764 NME9Q86XW9 330 aa20.69■□□□□ 0.9
TRAPPC6B-207ENST00000557764 LTV1Q96GA3 475 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC6B-207ENST00000557764 FAM208AQ9UK61 1670 aaKnown RBP20.69■□□□□ 0.9
TRAPPC6B-207ENST00000557764 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
TRAPPC6B-207ENST00000557764 RBM46Q8TBY0 533 aaKnown RBP20.67■□□□□ 0.9
TRAPPC6B-207ENST00000557764 HMGB2P26583 209 aaKnown RBP20.64■□□□□ 0.89
TRAPPC6B-207ENST00000557764 AMIGO3Q86WK7 504 aa20.64■□□□□ 0.89
TRAPPC6B-207ENST00000557764 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC6B-207ENST00000557764 IP6K1Q92551 441 aa20.64■□□□□ 0.89
TRAPPC6B-207ENST00000557764 RGPD2P0DJD1 1756 aa20.63■□□□□ 0.89
TRAPPC6B-207ENST00000557764 C4BP0C0L5 1744 aa20.63■□□□□ 0.89
TRAPPC6B-207ENST00000557764 TOGARAM1Q9Y4F4 1720 aa20.63■□□□□ 0.89
TRAPPC6B-207ENST00000557764 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
TRAPPC6B-207ENST00000557764 PHF14O94880 888 aa20.62■□□□□ 0.89
TRAPPC6B-207ENST00000557764 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
TRAPPC6B-207ENST00000557764 AK7Q96M32 723 aa20.62■□□□□ 0.89
TRAPPC6B-207ENST00000557764 FSTL1Q12841 308 aa20.61■□□□□ 0.89
TRAPPC6B-207ENST00000557764 SBNO2Q9Y2G9 1366 aa20.6■□□□□ 0.89
TRAPPC6B-207ENST00000557764 N4BP2Q86UW6 1770 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC6B-207ENST00000557764 MEGF6O75095 1541 aa20.6■□□□□ 0.89
TRAPPC6B-207ENST00000557764 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
TRAPPC6B-207ENST00000557764 PALLDQ8WX93 1383 aa20.59■□□□□ 0.89
TRAPPC6B-207ENST00000557764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
TRAPPC6B-207ENST00000557764 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
TRAPPC6B-207ENST00000557764 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
TRAPPC6B-207ENST00000557764 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
TRAPPC6B-207ENST00000557764 KIF13BQ9NQT8 1826 aa20.57■□□□□ 0.88
TRAPPC6B-207ENST00000557764 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
TRAPPC6B-207ENST00000557764 SLC34A2O95436 690 aa20.56■□□□□ 0.88
TRAPPC6B-207ENST00000557764 HOXD11P31277 338 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC6B-207ENST00000557764 HSPA1AP0DMV8 641 aaKnown RBP20.55■□□□□ 0.88
TRAPPC6B-207ENST00000557764 HSPA1BP0DMV9 641 aaKnown RBP20.55■□□□□ 0.88
TRAPPC6B-207ENST00000557764 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
TRAPPC6B-207ENST00000557764 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
TRAPPC6B-207ENST00000557764 A0A0G2JLW4 131 aa20.54■□□□□ 0.88
TRAPPC6B-207ENST00000557764 SSFA2P28290 1259 aa20.53■□□□□ 0.88
TRAPPC6B-207ENST00000557764 C9orf131Q5VYM1 1079 aa20.53■□□□□ 0.88
TRAPPC6B-207ENST00000557764 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC6B-207ENST00000557764 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
TRAPPC6B-207ENST00000557764 HOXC9P31274 260 aa20.52■□□□□ 0.88
TRAPPC6B-207ENST00000557764 TGFB2P61812 414 aa20.52■□□□□ 0.88
TRAPPC6B-207ENST00000557764 ITGB4P16144 1822 aa20.52■□□□□ 0.88
TRAPPC6B-207ENST00000557764 KCPQ6ZWJ8 1503 aa20.52■□□□□ 0.87
TRAPPC6B-207ENST00000557764 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.87
TRAPPC6B-207ENST00000557764 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 MMP10P09238 476 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 SMARCC1Q92922 1105 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 KDM2BQ8NHM5 1336 aa20.51■□□□□ 0.87
TRAPPC6B-207ENST00000557764 FCHSD2O94868 740 aa20.5■□□□□ 0.87
TRAPPC6B-207ENST00000557764 AMPHP49418 695 aa20.5■□□□□ 0.87
TRAPPC6B-207ENST00000557764 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
TRAPPC6B-207ENST00000557764 NBPF6Q5VWK0 638 aa20.49■□□□□ 0.87
TRAPPC6B-207ENST00000557764 USHBP1Q8N6Y0 703 aa20.49■□□□□ 0.87
TRAPPC6B-207ENST00000557764 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
TRAPPC6B-207ENST00000557764 NBPF4Q96M43 638 aa20.49■□□□□ 0.87
TRAPPC6B-207ENST00000557764 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
TRAPPC6B-207ENST00000557764 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
TRAPPC6B-207ENST00000557764 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
TRAPPC6B-207ENST00000557764 SLC12A5Q9H2X9 1139 aa20.48■□□□□ 0.87
TRAPPC6B-207ENST00000557764 DPEP1P16444 411 aa20.47■□□□□ 0.87
TRAPPC6B-207ENST00000557764 FBLN1P23142 703 aa20.47■□□□□ 0.87
TRAPPC6B-207ENST00000557764 TNRC6CQ9HCJ0 1690 aaKnown RBP20.47■□□□□ 0.87
TRAPPC6B-207ENST00000557764 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
TRAPPC6B-207ENST00000557764 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms