RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 CAMTA1Q9Y6Y1 1673 aa12.44□□□□□ -0.42
CHD8-214ENST00000557727 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
CHD8-214ENST00000557727 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
CHD8-214ENST00000557727 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
CHD8-214ENST00000557727 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
CHD8-214ENST00000557727 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
CHD8-214ENST00000557727 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
CHD8-214ENST00000557727 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
CHD8-214ENST00000557727 SNPHO15079 494 aa12.42□□□□□ -0.42
CHD8-214ENST00000557727 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
CHD8-214ENST00000557727 NSD2O96028 1365 aa12.42□□□□□ -0.42
CHD8-214ENST00000557727 FBLN1P23142 703 aa12.41□□□□□ -0.42
CHD8-214ENST00000557727 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
CHD8-214ENST00000557727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.424e-6■□□□□ 9.9
CHD8-214ENST00000557727 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
CHD8-214ENST00000557727 ZC3H6P61129 1189 aaKnown RBP12.4□□□□□ -0.42
CHD8-214ENST00000557727 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
CHD8-214ENST00000557727 AFF2P51816 1311 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 GLI3P10071 1580 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
CHD8-214ENST00000557727 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
CHD8-214ENST00000557727 CHRNA2Q15822 529 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 COG3Q96JB2 828 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 AATKQ6ZMQ8 1374 aa12.39□□□□□ -0.43
CHD8-214ENST00000557727 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
CHD8-214ENST00000557727 ATRNO75882 1429 aa12.38□□□□□ -0.43
CHD8-214ENST00000557727 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CHD8-214ENST00000557727 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
CHD8-214ENST00000557727 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
CHD8-214ENST00000557727 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
CHD8-214ENST00000557727 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
CHD8-214ENST00000557727 PRDM11Q9NQV5 511 aa12.37□□□□□ -0.43
CHD8-214ENST00000557727 FAM208AQ9UK61 1670 aaKnown RBP12.37□□□□□ -0.43
CHD8-214ENST00000557727 SOX12O15370 315 aa12.36□□□□□ -0.43
CHD8-214ENST00000557727 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
CHD8-214ENST00000557727 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
CHD8-214ENST00000557727 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
CHD8-214ENST00000557727 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
CHD8-214ENST00000557727 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
CHD8-214ENST00000557727 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
CHD8-214ENST00000557727 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
CHD8-214ENST00000557727 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
CHD8-214ENST00000557727 RGPD1P0DJD0 1748 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 USP21Q9UK80 565 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
CHD8-214ENST00000557727 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
CHD8-214ENST00000557727 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
CHD8-214ENST00000557727 PARD3Q8TEW0 1356 aa12.33□□□□□ -0.44
CHD8-214ENST00000557727 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
CHD8-214ENST00000557727 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
CHD8-214ENST00000557727 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
CHD8-214ENST00000557727 HOXC9P31274 260 aa12.32□□□□□ -0.44
CHD8-214ENST00000557727 IP6K1Q92551 441 aa12.32□□□□□ -0.44
CHD8-214ENST00000557727 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
CHD8-214ENST00000557727 FLT4P35916 1363 aa12.31□□□□□ -0.44
CHD8-214ENST00000557727 VPS72Q15906 364 aa12.31□□□□□ -0.44
CHD8-214ENST00000557727 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
CHD8-214ENST00000557727 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
CHD8-214ENST00000557727 ERBB3P21860 1342 aa12.31□□□□□ -0.44
CHD8-214ENST00000557727 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
CHD8-214ENST00000557727 INSRP06213 1382 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
CHD8-214ENST00000557727 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
CHD8-214ENST00000557727 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
CHD8-214ENST00000557727 CRB1P82279 1406 aa12.29□□□□□ -0.44
CHD8-214ENST00000557727 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
CHD8-214ENST00000557727 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
CHD8-214ENST00000557727 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
CHD8-214ENST00000557727 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
CHD8-214ENST00000557727 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
CHD8-214ENST00000557727 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
CHD8-214ENST00000557727 RGS12O14924 1447 aa12.28□□□□□ -0.44
CHD8-214ENST00000557727 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
CHD8-214ENST00000557727 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
CHD8-214ENST00000557727 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
CHD8-214ENST00000557727 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
CHD8-214ENST00000557727 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
CHD8-214ENST00000557727 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
CHD8-214ENST00000557727 AMPHP49418 695 aa12.26□□□□□ -0.45
CHD8-214ENST00000557727 DPY19L2Q6NUT2 758 aa12.26□□□□□ -0.45
CHD8-214ENST00000557727 MTHFSP49914 203 aa12.25□□□□□ -0.45
CHD8-214ENST00000557727 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
CHD8-214ENST00000557727 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
CHD8-214ENST00000557727 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
CHD8-214ENST00000557727 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CHD8-214ENST00000557727 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
CHD8-214ENST00000557727 ILDR2Q71H61 639 aa12.24□□□□□ -0.45
CHD8-214ENST00000557727 EP400Q96L91 3159 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 MEGF6O75095 1541 aa12.23□□□□□ -0.45
CHD8-214ENST00000557727 RXRBP28702 533 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms