RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 AVPP01185 164 aa7.91□□□□□ -1.14
MTHFD1-216ENST00000557539 PTCRAQ6ISU1 281 aaPredicted RBP7.91□□□□□ -1.14
MTHFD1-216ENST00000557539 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
MTHFD1-216ENST00000557539 CEP170Q5SW79 1584 aa7.9□□□□□ -1.14
MTHFD1-216ENST00000557539 YY1P25490 414 aa7.9□□□□□ -1.14
MTHFD1-216ENST00000557539 MRGPRX2Q96LB1 330 aa7.9□□□□□ -1.14
MTHFD1-216ENST00000557539 AMOTL2Q9Y2J4 779 aa7.9□□□□□ -1.14
MTHFD1-216ENST00000557539 TDRD9Q8NDG6 1382 aaKnown RBP7.89□□□□□ -1.15
MTHFD1-216ENST00000557539 SMPD1P17405 629 aa7.89□□□□□ -1.15
MTHFD1-216ENST00000557539 B4GALNT3Q6L9W6 998 aa7.89□□□□□ -1.15
MTHFD1-216ENST00000557539 CRIPAKQ8N1N5 446 aa7.89□□□□□ -1.15
MTHFD1-216ENST00000557539 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
MTHFD1-216ENST00000557539 SNIP1Q8TAD8 396 aaKnown RBP7.88□□□□□ -1.15
MTHFD1-216ENST00000557539 NUDT12Q9BQG2 462 aa7.88□□□□□ -1.15
MTHFD1-216ENST00000557539 TARBP1Q13395 1621 aaKnown RBP7.88□□□□□ -1.15
MTHFD1-216ENST00000557539 TTC24A2A3L6 582 aaPredicted RBP7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 J3QL48 77 aa7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 IGSF3O75054 1194 aa7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 NR1H3Q13133 447 aa7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 RC3H1Q5TC82 1133 aaKnown RBP7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 TOPBP1Q92547 1522 aa7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 CFTRP13569 1480 aa7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 MAGI1Q96QZ7 1491 aaPredicted RBP7.87□□□□□ -1.15
MTHFD1-216ENST00000557539 MADDQ8WXG6 1647 aa7.86□□□□□ -1.15
MTHFD1-216ENST00000557539 PIK3CDO00329 1044 aa7.86□□□□□ -1.15
MTHFD1-216ENST00000557539 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
MTHFD1-216ENST00000557539 GNEQ9Y223 722 aaKnown RBP7.86□□□□□ -1.15
MTHFD1-216ENST00000557539 STRCQ7RTU9 1775 aa7.86□□□□□ -1.15
MTHFD1-216ENST00000557539 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 WNT7BP56706 349 aa7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 ELOAQ14241 798 aaKnown RBP7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 TMEM164Q5U3C3 297 aa7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 ZMIZ1Q9ULJ6 1067 aa7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 NOVA2Q9UNW9 492 aaKnown RBP7.85□□□□□ -1.15
MTHFD1-216ENST00000557539 PEG3Q9GZU2 1588 aa7.84□□□□□ -1.15
MTHFD1-216ENST00000557539 AXIN1O15169 862 aa7.84□□□□□ -1.15
MTHFD1-216ENST00000557539 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
MTHFD1-216ENST00000557539 SKIP12755 728 aa7.84□□□□□ -1.15
MTHFD1-216ENST00000557539 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
MTHFD1-216ENST00000557539 TEX14Q8IWB6 1497 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 SIAH2O43255 324 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 PTPRNQ16849 979 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 CTC1Q2NKJ3 1217 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 HPS1Q92902 700 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 CEP350Q5VT06 3117 aa7.83□□□□□ -1.16
MTHFD1-216ENST00000557539 ARID4BQ4LE39 1312 aaPredicted RBP7.82□□□□□ -1.16
MTHFD1-216ENST00000557539 SH3BP2P78314 561 aa7.82□□□□□ -1.16
MTHFD1-216ENST00000557539 DESI1Q6ICB0 168 aa7.82□□□□□ -1.16
MTHFD1-216ENST00000557539 LYPD8Q6UX82 237 aa7.82□□□□□ -1.16
MTHFD1-216ENST00000557539 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
MTHFD1-216ENST00000557539 SETBP1Q9Y6X0 1596 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 TOM1O60784 492 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 DEPDC4Q8N2C3 294 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 UNC93B1Q9H1C4 597 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 FKBPLQ9UIM3 349 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 CFAP43Q8NDM7 1665 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 ADCY10Q96PN6 1610 aa7.81□□□□□ -1.16
MTHFD1-216ENST00000557539 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
MTHFD1-216ENST00000557539 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
MTHFD1-216ENST00000557539 RIMS1Q86UR5 1692 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 UNCXA6NJT0 531 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 BAP1Q92560 729 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 ZCCHC6Q5VYS8 1495 aaKnown RBP7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 GLI2P10070 1586 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 MROH2BQ7Z745 1585 aa7.79□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L15C9J2P7 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L13C9JLJ4 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L11C9JVI0 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L21D6R901 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L18D6R9N7 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L22D6RA61 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L17D6RBQ6 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L19D6RCP7 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L20D6RJB6 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 USP17L24Q0WX57 530 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 EHBP1Q8NDI1 1231 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 FAM174AQ8TBP5 190 aa7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
MTHFD1-216ENST00000557539 FAM196BA6NMK8 535 aa7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 ALDH1A1P00352 501 aa7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 RASA1P20936 1047 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms