RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 EN1Q05925 392 aaPredicted RBP22.61■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 PCDH11XQ9BZA7 1347 aa22.6■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 PCDH11YQ9BZA8 1340 aa22.6■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 NHSQ6T4R5 1651 aa22.6■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 PKD1L3Q7Z443 1732 aa22.6■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 BCL11BQ9C0K0 894 aaPredicted RBP22.59■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 IL13P35225 146 aa22.57■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 DOT1LQ8TEK3 1739 aa22.57■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 PARD3Q8TEW0 1356 aa22.56■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 SPG7Q9UQ90 795 aa22.56■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 EZH2Q15910 746 aaKnown RBP22.55■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 PTF1AQ7RTS3 328 aa22.55■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 KCNQ2O43526 872 aa22.54■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 PPP2R1AP30153 589 aa22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 SULT6B1Q6IMI4 303 aa22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 SYTL4Q96C24 671 aaPredicted RBP22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 CAMKK2Q96RR4 588 aa22.53■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.52■■□□□ 1.24e-8■■□□□ 13.3
TVP23C-CDRT4-204ENST00000557349 RREB1Q92766 1687 aa22.52■■□□□ 1.2
TVP23C-CDRT4-204ENST00000557349 KDRP35968 1356 aa22.51■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 CYP27B1O15528 508 aa22.51■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 BTAF1O14981 1849 aa22.5■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 U2SURPO15042 1029 aaKnown RBP22.49■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 PLSCR1O15162 318 aa22.48■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 HMOX1P09601 288 aa22.48■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 PLEKHO1Q53GL0 409 aaPredicted RBP22.48■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 IFNL2Q8IZJ0 200 aa22.47■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 AMOTQ4VCS5 1084 aa22.46■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 TOGARAM1Q9Y4F4 1720 aa22.45■■□□□ 1.19
TVP23C-CDRT4-204ENST00000557349 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 PHKG2P15735 406 aa22.45■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 ZNF530Q6P9A1 599 aaPredicted RBP22.45■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 RALBP1Q15311 655 aa22.44■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 NKX1-1Q15270 411 aaPredicted RBP22.42■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 C1orf141Q5JVX7 400 aa22.42■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 TXNRD1Q16881 649 aa22.41■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 NBPF14Q5TI25 921 aa22.41■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 MPRIPQ6WCQ1 1025 aa22.4■■□□□ 1.18
TVP23C-CDRT4-204ENST00000557349 PSDA5PKW4 1024 aaPredicted RBP22.39■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 ITGB4P16144 1822 aa22.38■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.171e-11■■■□□ 15.4
TVP23C-CDRT4-204ENST00000557349 MYBBP1AQ9BQG0 1328 aaKnown RBP22.37■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 R3HDM1Q15032 1099 aaKnown RBP22.37■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 PROM2Q8N271 834 aa22.37■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 DCAF5Q96JK2 942 aa22.37■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 TMOD3Q9NYL9 352 aa22.37■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 KDM6AO15550 1401 aaPredicted RBP22.35■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 LY75O60449 1722 aa22.34■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 PRKAR2BP31323 418 aa22.34■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 MTHFSDQ2M296 383 aaKnown RBP22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 AKAP4Q5JQC9 854 aa22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 SLC27A3Q5K4L6 730 aa22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 PIGBQ92521 554 aa22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 RSPH6AQ9H0K4 717 aa22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.17
TVP23C-CDRT4-204ENST00000557349 STK32BQ9NY57 414 aa22.32■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 PAPPAQ13219 1627 aa22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 ERVV-2B6SEH9 535 aa22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 GAS2L2Q8NHY3 880 aa22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 CCNL1Q9UK58 526 aaPredicted RBP22.31■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 CABP4P57796 275 aa22.3■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 LRRC4BQ9NT99 713 aa22.3■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 FCHSD2O94868 740 aa22.29■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 SCN11AQ9UI33 1791 aa22.29■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 KCNQ4P56696 695 aa22.28■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 MAP3K5Q99683 1374 aa22.27■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 NEFMP07197 916 aa22.27■■□□□ 1.16
TVP23C-CDRT4-204ENST00000557349 SLC15A2Q16348 729 aa22.26■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 PHACTR3Q96KR7 559 aa22.26■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 ASAP1Q9ULH1 1129 aa22.25■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 C5P01031 1676 aa22.24■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 MRC1P22897 1456 aa22.24■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 GNAT3A8MTJ3 354 aa22.24■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 RNMTO43148 476 aaKnown RBP22.24■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 VIRMAQ69YN4 1812 aaKnown RBP22.24■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 ADAMTS7Q9UKP4 1686 aa22.23■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 ZNF827Q17R98 1081 aa22.23■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 LGR6Q9HBX8 967 aa22.23■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms