RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 RBM46Q8TBY0 533 aaKnown RBP18.28■□□□□ 0.52
PSEN1-220ENST00000557037 LY75O60449 1722 aa18.28■□□□□ 0.52
PSEN1-220ENST00000557037 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
PSEN1-220ENST00000557037 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
PSEN1-220ENST00000557037 NSD2O96028 1365 aa18.27■□□□□ 0.51
PSEN1-220ENST00000557037 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-220ENST00000557037 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
PSEN1-220ENST00000557037 C16orf71Q8IYS4 520 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-220ENST00000557037 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
PSEN1-220ENST00000557037 PCNTO95613 3336 aa18.26■□□□□ 0.51
PSEN1-220ENST00000557037 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
PSEN1-220ENST00000557037 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
PSEN1-220ENST00000557037 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
PSEN1-220ENST00000557037 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
PSEN1-220ENST00000557037 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
PSEN1-220ENST00000557037 USP47Q96K76 1375 aa18.21■□□□□ 0.51
PSEN1-220ENST00000557037 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
PSEN1-220ENST00000557037 FSTL1Q12841 308 aa18.21■□□□□ 0.51
PSEN1-220ENST00000557037 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
PSEN1-220ENST00000557037 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
PSEN1-220ENST00000557037 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
PSEN1-220ENST00000557037 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
PSEN1-220ENST00000557037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.5
PSEN1-220ENST00000557037 LTV1Q96GA3 475 aaPredicted RBP18.19■□□□□ 0.5
PSEN1-220ENST00000557037 PHF14O94880 888 aa18.18■□□□□ 0.5
PSEN1-220ENST00000557037 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
PSEN1-220ENST00000557037 C5P01031 1676 aa18.17■□□□□ 0.5
PSEN1-220ENST00000557037 LTN1O94822 1766 aa18.17■□□□□ 0.5
PSEN1-220ENST00000557037 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
PSEN1-220ENST00000557037 NME9Q86XW9 330 aa18.15■□□□□ 0.5
PSEN1-220ENST00000557037 AK7Q96M32 723 aa18.15■□□□□ 0.5
PSEN1-220ENST00000557037 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
PSEN1-220ENST00000557037 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
PSEN1-220ENST00000557037 C9orf131Q5VYM1 1079 aa18.14■□□□□ 0.49
PSEN1-220ENST00000557037 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
PSEN1-220ENST00000557037 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.49
PSEN1-220ENST00000557037 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
PSEN1-220ENST00000557037 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
PSEN1-220ENST00000557037 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
PSEN1-220ENST00000557037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
PSEN1-220ENST00000557037 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
PSEN1-220ENST00000557037 KCPQ6ZWJ8 1503 aa18.12■□□□□ 0.49
PSEN1-220ENST00000557037 TAF1LQ8IZX4 1826 aa18.11■□□□□ 0.49
PSEN1-220ENST00000557037 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-220ENST00000557037 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
PSEN1-220ENST00000557037 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
PSEN1-220ENST00000557037 SMC1BQ8NDV3 1235 aa18.1■□□□□ 0.49
PSEN1-220ENST00000557037 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
PSEN1-220ENST00000557037 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
PSEN1-220ENST00000557037 FCHSD2O94868 740 aa18.09■□□□□ 0.49
PSEN1-220ENST00000557037 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.49
PSEN1-220ENST00000557037 MMP10P09238 476 aa18.08■□□□□ 0.48
PSEN1-220ENST00000557037 IP6K1Q92551 441 aa18.08■□□□□ 0.48
PSEN1-220ENST00000557037 PCDH10Q9P2E7 1040 aa18.08■□□□□ 0.48
PSEN1-220ENST00000557037 MEGF6O75095 1541 aa18.08■□□□□ 0.48
PSEN1-220ENST00000557037 PLEKHG2Q9H7P9 1386 aa18.07■□□□□ 0.48
PSEN1-220ENST00000557037 DPEP1P16444 411 aa18.07■□□□□ 0.48
PSEN1-220ENST00000557037 MPRIPQ6WCQ1 1025 aa18.07■□□□□ 0.48
PSEN1-220ENST00000557037 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
PSEN1-220ENST00000557037 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
PSEN1-220ENST00000557037 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
PSEN1-220ENST00000557037 TGFB2P61812 414 aa18.05■□□□□ 0.48
PSEN1-220ENST00000557037 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
PSEN1-220ENST00000557037 MON2Q7Z3U7 1717 aa18.04■□□□□ 0.48
PSEN1-220ENST00000557037 SSFA2P28290 1259 aa18.04■□□□□ 0.48
PSEN1-220ENST00000557037 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
PSEN1-220ENST00000557037 C10orf71Q711Q0 1435 aa18.03■□□□□ 0.48
PSEN1-220ENST00000557037 FAM208AQ9UK61 1670 aaKnown RBP18.03■□□□□ 0.48
PSEN1-220ENST00000557037 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.48
PSEN1-220ENST00000557037 PKD1L3Q7Z443 1732 aa18.02■□□□□ 0.48
PSEN1-220ENST00000557037 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
PSEN1-220ENST00000557037 NSD3Q9BZ95 1437 aa18.02■□□□□ 0.48
PSEN1-220ENST00000557037 KIF13BQ9NQT8 1826 aa18.02■□□□□ 0.47
PSEN1-220ENST00000557037 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
PSEN1-220ENST00000557037 GNPATO15228 680 aa18.01■□□□□ 0.47
PSEN1-220ENST00000557037 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
PSEN1-220ENST00000557037 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
PSEN1-220ENST00000557037 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
PSEN1-220ENST00000557037 FOXN1O15353 648 aa17.98■□□□□ 0.47
PSEN1-220ENST00000557037 FBLN1P23142 703 aa17.98■□□□□ 0.47
PSEN1-220ENST00000557037 HOXC9P31274 260 aa17.98■□□□□ 0.47
PSEN1-220ENST00000557037 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
PSEN1-220ENST00000557037 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
PSEN1-220ENST00000557037 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
PSEN1-220ENST00000557037 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
PSEN1-220ENST00000557037 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
PSEN1-220ENST00000557037 KCNA3P22001 575 aa17.96■□□□□ 0.47
PSEN1-220ENST00000557037 AMPHP49418 695 aa17.96■□□□□ 0.47
PSEN1-220ENST00000557037 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
PSEN1-220ENST00000557037 MAP3K19Q56UN5 1328 aa17.96■□□□□ 0.46
PSEN1-220ENST00000557037 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
PSEN1-220ENST00000557037 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 SIK1P57059 783 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 ITPK1Q13572 414 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 PIGBQ92521 554 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
PSEN1-220ENST00000557037 ARFGEF1Q9Y6D6 1849 aa17.94■□□□□ 0.46
PSEN1-220ENST00000557037 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-220ENST00000557037 TMF1P82094 1093 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms