RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FOXK1P85037 733 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 ABTB2Q8N961 1025 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 PLCH1Q4KWH8 1693 aa13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 GLI3P10071 1580 aa13.92□□□□□ -0.18
HNRNPC-228ENST00000557033 NLRP13Q86W25 1043 aa13.91□□□□□ -0.18
HNRNPC-228ENST00000557033 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
HNRNPC-228ENST00000557033 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-228ENST00000557033 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
HNRNPC-228ENST00000557033 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
HNRNPC-228ENST00000557033 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
HNRNPC-228ENST00000557033 CARD11Q9BXL7 1154 aa13.9□□□□□ -0.18
HNRNPC-228ENST00000557033 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
HNRNPC-228ENST00000557033 OSBPP22059 807 aa13.89□□□□□ -0.19
HNRNPC-228ENST00000557033 FECHP22830 423 aa13.89□□□□□ -0.19
HNRNPC-228ENST00000557033 HIC1Q14526 733 aa13.89□□□□□ -0.19
HNRNPC-228ENST00000557033 SEPT12Q8IYM1 358 aa13.89□□□□□ -0.19
HNRNPC-228ENST00000557033 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
HNRNPC-228ENST00000557033 NUTM2GQ5VZR2 741 aa13.88□□□□□ -0.19
HNRNPC-228ENST00000557033 PCMTD1Q96MG8 357 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-228ENST00000557033 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
HNRNPC-228ENST00000557033 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-228ENST00000557033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
HNRNPC-228ENST00000557033 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
HNRNPC-228ENST00000557033 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
HNRNPC-228ENST00000557033 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 FCHSD2O94868 740 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 GCP02774 474 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 USP6P35125 1406 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 USP19O94966 1318 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
HNRNPC-228ENST00000557033 CPDO75976 1380 aa13.85□□□□□ -0.19
HNRNPC-228ENST00000557033 CHRNA2Q15822 529 aa13.85□□□□□ -0.19
HNRNPC-228ENST00000557033 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
HNRNPC-228ENST00000557033 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 EVA1CP58658 441 aa13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 BRWD3Q6RI45 1802 aa13.84□□□□□ -0.19
HNRNPC-228ENST00000557033 MS4A1P11836 297 aa13.83□□□□□ -0.2
HNRNPC-228ENST00000557033 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
HNRNPC-228ENST00000557033 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
HNRNPC-228ENST00000557033 A0A0G2JS52 829 aa13.82□□□□□ -0.2
HNRNPC-228ENST00000557033 MYT1Q01538 1121 aa13.82□□□□□ -0.2
HNRNPC-228ENST00000557033 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
HNRNPC-228ENST00000557033 NRKQ7Z2Y5 1582 aa13.82□□□□□ -0.2
HNRNPC-228ENST00000557033 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
HNRNPC-228ENST00000557033 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-228ENST00000557033 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-228ENST00000557033 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-228ENST00000557033 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
HNRNPC-228ENST00000557033 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
HNRNPC-228ENST00000557033 PTGER2P43116 358 aa13.8□□□□□ -0.2
HNRNPC-228ENST00000557033 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-228ENST00000557033 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
HNRNPC-228ENST00000557033 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-228ENST00000557033 CAMTA1Q9Y6Y1 1673 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 AKAP12Q02952 1782 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 MCM6Q14566 821 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 THRAP3Q9Y2W1 955 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 SLIT3O75094 1523 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 EP400Q96L91 3159 aa13.79□□□□□ -0.2
HNRNPC-228ENST00000557033 ST20-MTHFSA0A0A6YYL1 179 aa13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
HNRNPC-228ENST00000557033 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 TCP11L2Q8N4U5 519 aa13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 REPIN1Q9BWE0 567 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.21
HNRNPC-228ENST00000557033 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
HNRNPC-228ENST00000557033 SH3D19Q5HYK7 790 aa13.76□□□□□ -0.21
HNRNPC-228ENST00000557033 TESK2Q96S53 571 aa13.76□□□□□ -0.21
HNRNPC-228ENST00000557033 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
HNRNPC-228ENST00000557033 TIE1P35590 1138 aa13.75□□□□□ -0.21
HNRNPC-228ENST00000557033 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
HNRNPC-228ENST00000557033 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-228ENST00000557033 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
HNRNPC-228ENST00000557033 MON2Q7Z3U7 1717 aa13.74□□□□□ -0.21
HNRNPC-228ENST00000557033 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
HNRNPC-228ENST00000557033 FAM196AQ6ZSG2 479 aa13.74□□□□□ -0.21
HNRNPC-228ENST00000557033 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms