RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TFCP2L1Q9NZI6 479 aa18.18■□□□□ 0.5
PSEN1-219ENST00000556951 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
PSEN1-219ENST00000556951 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
PSEN1-219ENST00000556951 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
PSEN1-219ENST00000556951 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
PSEN1-219ENST00000556951 C16orf71Q8IYS4 520 aaPredicted RBP18.16■□□□□ 0.5
PSEN1-219ENST00000556951 IL2RBP14784 551 aa18.14■□□□□ 0.49
PSEN1-219ENST00000556951 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
PSEN1-219ENST00000556951 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
PSEN1-219ENST00000556951 ERBB3P21860 1342 aa18.14■□□□□ 0.49
PSEN1-219ENST00000556951 ABCC6O95255 1503 aa18.13■□□□□ 0.49
PSEN1-219ENST00000556951 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
PSEN1-219ENST00000556951 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
PSEN1-219ENST00000556951 MLLT1Q03111 559 aaPredicted RBP18.12■□□□□ 0.49
PSEN1-219ENST00000556951 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
PSEN1-219ENST00000556951 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
PSEN1-219ENST00000556951 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
PSEN1-219ENST00000556951 KCNQ4P56696 695 aa18.1■□□□□ 0.49
PSEN1-219ENST00000556951 MSL1Q68DK7 614 aa18.09■□□□□ 0.49
PSEN1-219ENST00000556951 NME9Q86XW9 330 aa18.09■□□□□ 0.49
PSEN1-219ENST00000556951 ANKRD24Q8TF21 1146 aa18.09■□□□□ 0.49
PSEN1-219ENST00000556951 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
PSEN1-219ENST00000556951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
PSEN1-219ENST00000556951 MSH5O43196 834 aa18.07■□□□□ 0.48
PSEN1-219ENST00000556951 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-219ENST00000556951 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
PSEN1-219ENST00000556951 CLSPNQ9HAW4 1339 aa18.06■□□□□ 0.48
PSEN1-219ENST00000556951 RGS19P49795 217 aa18.06■□□□□ 0.48
PSEN1-219ENST00000556951 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
PSEN1-219ENST00000556951 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
PSEN1-219ENST00000556951 C10orf71Q711Q0 1435 aa18.05■□□□□ 0.48
PSEN1-219ENST00000556951 USP54Q70EL1 1684 aa18.04■□□□□ 0.48
PSEN1-219ENST00000556951 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
PSEN1-219ENST00000556951 SMC1BQ8NDV3 1235 aa18.03■□□□□ 0.48
PSEN1-219ENST00000556951 ABHD8Q96I13 439 aa18.03■□□□□ 0.48
PSEN1-219ENST00000556951 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
PSEN1-219ENST00000556951 NSD2O96028 1365 aa18.03■□□□□ 0.48
PSEN1-219ENST00000556951 TNRC18O15417 2968 aaPredicted RBP18.02■□□□□ 0.48
PSEN1-219ENST00000556951 FOXN1O15353 648 aa18.02■□□□□ 0.48
PSEN1-219ENST00000556951 LY75O60449 1722 aa18.02■□□□□ 0.48
PSEN1-219ENST00000556951 IP6K1Q92551 441 aa18.01■□□□□ 0.47
PSEN1-219ENST00000556951 LTN1O94822 1766 aa18■□□□□ 0.47
PSEN1-219ENST00000556951 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
PSEN1-219ENST00000556951 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
PSEN1-219ENST00000556951 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
PSEN1-219ENST00000556951 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
PSEN1-219ENST00000556951 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
PSEN1-219ENST00000556951 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
PSEN1-219ENST00000556951 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
PSEN1-219ENST00000556951 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
PSEN1-219ENST00000556951 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
PSEN1-219ENST00000556951 SYTL4Q96C24 671 aaPredicted RBP17.97■□□□□ 0.47
PSEN1-219ENST00000556951 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
PSEN1-219ENST00000556951 RRAGCQ9HB90 399 aa17.97■□□□□ 0.47
PSEN1-219ENST00000556951 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
PSEN1-219ENST00000556951 CCNL1Q9UK58 526 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-219ENST00000556951 FBLN1P23142 703 aa17.95■□□□□ 0.46
PSEN1-219ENST00000556951 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
PSEN1-219ENST00000556951 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-219ENST00000556951 TMC1Q8TDI8 760 aa17.94■□□□□ 0.46
PSEN1-219ENST00000556951 EDC4Q6P2E9 1401 aaKnown RBP17.94■□□□□ 0.46
PSEN1-219ENST00000556951 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
PSEN1-219ENST00000556951 HDGFL2Q7Z4V5 671 aaPredicted RBP17.93■□□□□ 0.46
PSEN1-219ENST00000556951 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
PSEN1-219ENST00000556951 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
PSEN1-219ENST00000556951 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
PSEN1-219ENST00000556951 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
PSEN1-219ENST00000556951 HOXC9P31274 260 aa17.91■□□□□ 0.46
PSEN1-219ENST00000556951 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
PSEN1-219ENST00000556951 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
PSEN1-219ENST00000556951 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
PSEN1-219ENST00000556951 MEGF6O75095 1541 aa17.9■□□□□ 0.46
PSEN1-219ENST00000556951 CCDC85CA6NKD9 419 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 FLAD1Q8NFF5 587 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
PSEN1-219ENST00000556951 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
PSEN1-219ENST00000556951 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
PSEN1-219ENST00000556951 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
PSEN1-219ENST00000556951 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
PSEN1-219ENST00000556951 KIF13BQ9NQT8 1826 aa17.88■□□□□ 0.45
PSEN1-219ENST00000556951 USP47Q96K76 1375 aa17.88■□□□□ 0.45
PSEN1-219ENST00000556951 LBX1P52954 281 aa17.87■□□□□ 0.45
PSEN1-219ENST00000556951 AIDAQ96BJ3 306 aa17.87■□□□□ 0.45
PSEN1-219ENST00000556951 MKRN1Q9UHC7 482 aaKnown RBP17.87■□□□□ 0.45
PSEN1-219ENST00000556951 C5P01031 1676 aa17.87■□□□□ 0.45
PSEN1-219ENST00000556951 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
PSEN1-219ENST00000556951 AMPHP49418 695 aa17.85■□□□□ 0.45
PSEN1-219ENST00000556951 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
PSEN1-219ENST00000556951 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
PSEN1-219ENST00000556951 BRCA1P38398 1863 aaKnown RBP17.84■□□□□ 0.45
PSEN1-219ENST00000556951 COG3Q96JB2 828 aa17.83■□□□□ 0.44
PSEN1-219ENST00000556951 TAF1LQ8IZX4 1826 aa17.83■□□□□ 0.44
PSEN1-219ENST00000556951 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
PSEN1-219ENST00000556951 CREBZFQ9NS37 354 aa17.82■□□□□ 0.44
PSEN1-219ENST00000556951 CGNL1Q0VF96 1302 aa17.81■□□□□ 0.44
PSEN1-219ENST00000556951 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms