RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SYNMO15061 1565 aa7.67□□□□□ -1.18
ATXN3-244ENST00000556898 CLTCL1P53675 1640 aa7.67□□□□□ -1.18
ATXN3-244ENST00000556898 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 CLSPNQ9HAW4 1339 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 NOS1P29475 1434 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 ARHGAP31Q2M1Z3 1444 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 TRPM2O94759 1503 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-244ENST00000556898 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
ATXN3-244ENST00000556898 CCDC144AA2RUR9 1427 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 CFHP08603 1231 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 RXRBP28702 533 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-244ENST00000556898 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
ATXN3-244ENST00000556898 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
ATXN3-244ENST00000556898 CFAP65Q6ZU64 1925 aaKnown RBP7.64□□□□□ -1.19
ATXN3-244ENST00000556898 MSH6P52701 1360 aa7.64□□□□□ -1.19
ATXN3-244ENST00000556898 TONSLQ96HA7 1378 aa7.64□□□□□ -1.19
ATXN3-244ENST00000556898 SPATA31A6Q5VVP1 1343 aa7.64□□□□□ -1.19
ATXN3-244ENST00000556898 IDI1Q13907 227 aa7.64□□□□□ -1.19
ATXN3-244ENST00000556898 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
ATXN3-244ENST00000556898 SLIT1O75093 1534 aa7.63□□□□□ -1.19
ATXN3-244ENST00000556898 POTECB2RU33 542 aa7.63□□□□□ -1.19
ATXN3-244ENST00000556898 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
ATXN3-244ENST00000556898 ZNF598Q86UK7 904 aaKnown RBP7.63□□□□□ -1.19
ATXN3-244ENST00000556898 ANKLE1Q8NAG6 615 aa7.63□□□□□ -1.19
ATXN3-244ENST00000556898 ZNF775Q96BV0 537 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-244ENST00000556898 SPATA31E1Q6ZUB1 1445 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 ZEB1P37275 1124 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-244ENST00000556898 MYT1Q01538 1121 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 NBPF8Q3BBV2 869 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 NUTM2DQ5VT03 806 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-244ENST00000556898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-244ENST00000556898 PXYLP1Q8TE99 480 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
ATXN3-244ENST00000556898 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ATXN3-244ENST00000556898 PIK3C2BO00750 1634 aa7.61□□□□□ -1.19
ATXN3-244ENST00000556898 GDF9O60383 454 aa7.61□□□□□ -1.19
ATXN3-244ENST00000556898 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-244ENST00000556898 FCHSD2O94868 740 aa7.61□□□□□ -1.19
ATXN3-244ENST00000556898 PUS10Q3MIT2 529 aaKnown RBP7.61□□□□□ -1.19
ATXN3-244ENST00000556898 ZNF326Q5BKZ1 582 aaKnown RBP7.61□□□□□ -1.19
ATXN3-244ENST00000556898 DCAF11Q8TEB1 546 aa7.61□□□□□ -1.19
ATXN3-244ENST00000556898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.6□□□□□ -1.19
ATXN3-244ENST00000556898 TULP1O00294 542 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-244ENST00000556898 ADH1BP00325 375 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 ZNF697Q5TEC3 545 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 SCUBE3Q8IX30 993 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 ADGRB3O60242 1522 aa7.6□□□□□ -1.19
ATXN3-244ENST00000556898 TNFRSF10AO00220 468 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 ATF3P18847 181 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 FECHP22830 423 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 PRR20EP86478 221 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 PRR20CP86479 221 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 PRR20DP86480 221 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 PRR20BP86481 221 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 PRR20AP86496 221 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
ATXN3-244ENST00000556898 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-244ENST00000556898 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-244ENST00000556898 NR1I2O75469 434 aa7.58□□□□□ -1.2
ATXN3-244ENST00000556898 DGAT1O75907 488 aa7.58□□□□□ -1.2
ATXN3-244ENST00000556898 PKDCCQ504Y2 493 aa7.58□□□□□ -1.2
ATXN3-244ENST00000556898 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
ATXN3-244ENST00000556898 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-244ENST00000556898 TMEM131LA2VDJ0 1609 aa7.58□□□□□ -1.2
ATXN3-244ENST00000556898 ADGRF5Q8IZF2 1346 aa7.57□□□□□ -1.2
ATXN3-244ENST00000556898 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
ATXN3-244ENST00000556898 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
ATXN3-244ENST00000556898 RBM26Q5T8P6 1007 aaKnown RBP7.57□□□□□ -1.2
ATXN3-244ENST00000556898 METTL3Q86U44 580 aaKnown RBP7.57□□□□□ -1.2
ATXN3-244ENST00000556898 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
ATXN3-244ENST00000556898 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
ATXN3-244ENST00000556898 TIMELESSQ9UNS1 1208 aa7.57□□□□□ -1.2
ATXN3-244ENST00000556898 KIF1BO60333 1816 aa7.57□□□□□ -1.2
ATXN3-244ENST00000556898 MYO5BQ9ULV0 1848 aa7.57□□□□□ -1.2
ATXN3-244ENST00000556898 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 GPR37O15354 613 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 OATP04181 439 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-244ENST00000556898 NLRP7Q8WX94 980 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 NEXMIFQ5QGS0 1516 aa7.56□□□□□ -1.2
ATXN3-244ENST00000556898 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-244ENST00000556898 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 RIMS2Q9UQ26 1411 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
ATXN3-244ENST00000556898 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms