RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 TMF1P82094 1093 aa19.5■□□□□ 0.71
TRAPPC6B-206ENST00000556765 PCNTO95613 3336 aa19.5■□□□□ 0.71
TRAPPC6B-206ENST00000556765 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
TRAPPC6B-206ENST00000556765 SOX12O15370 315 aa19.48■□□□□ 0.71
TRAPPC6B-206ENST00000556765 PRELPP51888 382 aa19.47■□□□□ 0.71
TRAPPC6B-206ENST00000556765 KCNQ4P56696 695 aa19.47■□□□□ 0.71
TRAPPC6B-206ENST00000556765 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
TRAPPC6B-206ENST00000556765 CABP2Q9NPB3 220 aa19.47■□□□□ 0.71
TRAPPC6B-206ENST00000556765 MSH5O43196 834 aa19.46■□□□□ 0.71
TRAPPC6B-206ENST00000556765 TESK2Q96S53 571 aa19.46■□□□□ 0.71
TRAPPC6B-206ENST00000556765 CD2APQ9Y5K6 639 aa19.46■□□□□ 0.71
TRAPPC6B-206ENST00000556765 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC6B-206ENST00000556765 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
TRAPPC6B-206ENST00000556765 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
TRAPPC6B-206ENST00000556765 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
TRAPPC6B-206ENST00000556765 IL2RBP14784 551 aa19.44■□□□□ 0.7
TRAPPC6B-206ENST00000556765 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
TRAPPC6B-206ENST00000556765 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
TRAPPC6B-206ENST00000556765 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC6B-206ENST00000556765 NLRP2Q9NX02 1062 aa19.42■□□□□ 0.7
TRAPPC6B-206ENST00000556765 NFAT5O94916 1531 aa19.41■□□□□ 0.7
TRAPPC6B-206ENST00000556765 TOMM70O94826 608 aa19.41■□□□□ 0.7
TRAPPC6B-206ENST00000556765 ERBB3P21860 1342 aa19.39■□□□□ 0.69
TRAPPC6B-206ENST00000556765 WDR90Q96KV7 1748 aa19.39■□□□□ 0.69
TRAPPC6B-206ENST00000556765 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
TRAPPC6B-206ENST00000556765 JMYQ8N9B5 988 aa19.38■□□□□ 0.69
TRAPPC6B-206ENST00000556765 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
TRAPPC6B-206ENST00000556765 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC6B-206ENST00000556765 SYTL4Q96C24 671 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC6B-206ENST00000556765 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
TRAPPC6B-206ENST00000556765 LY75O60449 1722 aa19.37■□□□□ 0.69
TRAPPC6B-206ENST00000556765 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
TRAPPC6B-206ENST00000556765 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
TRAPPC6B-206ENST00000556765 CCNL1Q9UK58 526 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC6B-206ENST00000556765 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
TRAPPC6B-206ENST00000556765 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
TRAPPC6B-206ENST00000556765 HTRA3P83110 453 aa19.34■□□□□ 0.69
TRAPPC6B-206ENST00000556765 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC6B-206ENST00000556765 ANKRD36BQ8N2N9 1353 aa19.33■□□□□ 0.69
TRAPPC6B-206ENST00000556765 TTC21AQ8NDW8 1320 aa19.33■□□□□ 0.69
TRAPPC6B-206ENST00000556765 POLR3GLQ9BT43 218 aa19.33■□□□□ 0.68
TRAPPC6B-206ENST00000556765 NSD2O96028 1365 aa19.32■□□□□ 0.68
TRAPPC6B-206ENST00000556765 SLC34A2O95436 690 aa19.32■□□□□ 0.68
TRAPPC6B-206ENST00000556765 ANKRD24Q8TF21 1146 aa19.31■□□□□ 0.68
TRAPPC6B-206ENST00000556765 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC6B-206ENST00000556765 CICQ96RK0 1608 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC6B-206ENST00000556765 DOT1LQ8TEK3 1739 aa19.31■□□□□ 0.68
TRAPPC6B-206ENST00000556765 RALBP1Q15311 655 aa19.29■□□□□ 0.68
TRAPPC6B-206ENST00000556765 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
TRAPPC6B-206ENST00000556765 NMRK2Q9NPI5 230 aa19.29■□□□□ 0.68
TRAPPC6B-206ENST00000556765 FLAD1Q8NFF5 587 aa19.28■□□□□ 0.68
TRAPPC6B-206ENST00000556765 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
TRAPPC6B-206ENST00000556765 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
TRAPPC6B-206ENST00000556765 LTN1O94822 1766 aa19.24■□□□□ 0.67
TRAPPC6B-206ENST00000556765 C5P01031 1676 aa19.24■□□□□ 0.67
TRAPPC6B-206ENST00000556765 C16orf71Q8IYS4 520 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC6B-206ENST00000556765 FSTL1Q12841 308 aa19.23■□□□□ 0.67
TRAPPC6B-206ENST00000556765 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
TRAPPC6B-206ENST00000556765 USP54Q70EL1 1684 aa19.22■□□□□ 0.67
TRAPPC6B-206ENST00000556765 PER1O15534 1290 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC6B-206ENST00000556765 MYBBP1AQ9BQG0 1328 aaKnown RBP19.2■□□□□ 0.66
TRAPPC6B-206ENST00000556765 HMGB2P26583 209 aaKnown RBP19.19■□□□□ 0.66
TRAPPC6B-206ENST00000556765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRAPPC6B-206ENST00000556765 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
TRAPPC6B-206ENST00000556765 PANK3Q9H999 370 aa19.19■□□□□ 0.66
TRAPPC6B-206ENST00000556765 HSPA1AP0DMV8 641 aaKnown RBP19.18■□□□□ 0.66
TRAPPC6B-206ENST00000556765 HSPA1BP0DMV9 641 aaKnown RBP19.18■□□□□ 0.66
TRAPPC6B-206ENST00000556765 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
TRAPPC6B-206ENST00000556765 KNSTRNQ9Y448 316 aa19.18■□□□□ 0.66
TRAPPC6B-206ENST00000556765 AMIGO3Q86WK7 504 aa19.17■□□□□ 0.66
TRAPPC6B-206ENST00000556765 AK7Q96M32 723 aa19.17■□□□□ 0.66
TRAPPC6B-206ENST00000556765 FAM208AQ9UK61 1670 aaKnown RBP19.17■□□□□ 0.66
TRAPPC6B-206ENST00000556765 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 PHF14O94880 888 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 NME9Q86XW9 330 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 LTV1Q96GA3 475 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 BCS1LQ9Y276 419 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 MON2Q7Z3U7 1717 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
TRAPPC6B-206ENST00000556765 C4BP0C0L5 1744 aa19.15■□□□□ 0.66
TRAPPC6B-206ENST00000556765 TOGARAM1Q9Y4F4 1720 aa19.15■□□□□ 0.66
TRAPPC6B-206ENST00000556765 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
TRAPPC6B-206ENST00000556765 SMIM5Q71RC9 77 aa19.14■□□□□ 0.65
TRAPPC6B-206ENST00000556765 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
TRAPPC6B-206ENST00000556765 PALLDQ8WX93 1383 aa19.14■□□□□ 0.65
TRAPPC6B-206ENST00000556765 PLEKHG2Q9H7P9 1386 aa19.14■□□□□ 0.65
TRAPPC6B-206ENST00000556765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.13■□□□□ 0.65
TRAPPC6B-206ENST00000556765 IP6K1Q92551 441 aa19.13■□□□□ 0.65
TRAPPC6B-206ENST00000556765 NSD3Q9BZ95 1437 aa19.13■□□□□ 0.65
TRAPPC6B-206ENST00000556765 MEGF6O75095 1541 aa19.13■□□□□ 0.65
TRAPPC6B-206ENST00000556765 UBR3Q6ZT12 1888 aa19.11■□□□□ 0.65
TRAPPC6B-206ENST00000556765 C10orf71Q711Q0 1435 aa19.11■□□□□ 0.65
TRAPPC6B-206ENST00000556765 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
TRAPPC6B-206ENST00000556765 C9orf131Q5VYM1 1079 aa19.11■□□□□ 0.65
TRAPPC6B-206ENST00000556765 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
TRAPPC6B-206ENST00000556765 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
TRAPPC6B-206ENST00000556765 INSRP06213 1382 aa19.1■□□□□ 0.65
TRAPPC6B-206ENST00000556765 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC6B-206ENST00000556765 SSFA2P28290 1259 aa19.09■□□□□ 0.65
TRAPPC6B-206ENST00000556765 TGFB2P61812 414 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms